RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ATP8B1O43520 1251 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 SLC16A7O60669 478 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 AQP8O94778 261 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 HLA-AP01891 365 aaKnown RBP3.2□□□□□ -1.9
PTCD3-205ENST00000464541 CD5P06127 495 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 NPY1RP25929 384 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 HSD11B1P28845 292 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 SLCO1A2P46721 670 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 SERPINB8P50452 374 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 NKX2-5P52952 324 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-205ENST00000464541 AP2S1P53680 142 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-205ENST00000464541 ARPC4P59998 168 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 ACTBP60709 375 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 RAP1AP62834 184 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 ACTG1P63261 375 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 PRKCDQ05655 676 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 C2orf54Q08AI8 447 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 TCP10Q12799 353 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 TSPAN31Q12999 210 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 DYNC1I2Q13409 638 aaKnown RBP3.2□□□□□ -1.9
PTCD3-205ENST00000464541 GINS1Q14691 196 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 SPA17Q15506 151 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 OR7A5Q15622 319 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 TIMM23BQ5SRD1 257 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 HBMQ6B0K9 141 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 NIPAL1Q6NVV3 410 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 MBOAT2Q6ZWT7 520 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 AKAP14Q86UN6 197 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 OR8G5Q8NG78 346 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 OR10Z1Q8NGY1 313 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 ACTL9Q8TC94 416 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 DYNC2LI1Q8TCX1 351 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 SFXN5Q8TD22 340 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 APH1BQ8WW43 257 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 P2RX4Q99571 388 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 HMG20AQ9NP66 347 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF355PQ9NSJ1 428 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 NLE1Q9NVX2 485 aaPredicted RBP3.2□□□□□ -1.9
PTCD3-205ENST00000464541 IL37Q9NZH6 218 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 STOML2Q9UJZ1 356 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 CES1P1Q9UKY3 287 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 TFR2Q9UP52 801 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 USH1CQ9Y6N9 552 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 COL22A1Q8NFW1 1626 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 IGKV1D-17A0A075B6S4 117 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 CIB4A0PJX0 185 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 ISPDA4D126 451 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 COLCA2A8K830 154 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 F6UB75 175 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 H0Y980 276 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 M0QZ92 97 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 FABP7O15540 132 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 ATP6V1G2O95670 118 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 RAB3DO95716 219 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 RLN2P04090 185 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 OR5AL1P0C617 328 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 COX5BP10606 129 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 CELP19835 753 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 F8A1P23610 371 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 PSMB5P28074 263 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 LOXP28300 417 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 HRH1P35367 487 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 SERPINB9P50453 376 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 RORCP51449 518 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 RAB8AP61006 207 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 POLR2GP62487 172 aaKnown RBP eCLIP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 ESRRGP62508 458 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 ARG2P78540 354 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 SLC25A11Q02978 314 aaKnown RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 NAB1Q13506 487 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 TRIP13Q15645 432 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 GCSAMLQ5JQS6 135 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 DRAM2Q6UX65 266 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 MRPL55Q7Z7F7 128 aaKnown RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 SLC13A5Q86YT5 568 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 CBR4Q8N4T8 237 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 TMEM156Q8N614 296 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 LRRC52Q8N7C0 313 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 OR5L1Q8NGL2 311 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 OR10R2Q8NGX6 335 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 SYNPRQ8TBG9 265 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 OR51E1Q8TCB6 317 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 TMEM230Q96A57 120 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 CREB3L1Q96BA8 519 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 ADTRPQ96IZ2 230 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 HBEGFQ99075 208 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 VAT1Q99536 393 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 APOL4Q9BPW4 351 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 REEP1Q9H902 201 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 RDH14Q9HBH5 336 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 EXOSC4Q9NPD3 245 aaKnown RBP3.19□□□□□ -1.9
PTCD3-205ENST00000464541 ACOT13Q9NPJ3 140 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 AP3M1Q9Y2T2 418 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 SNX24Q9Y343 169 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 LRRC42Q9Y546 428 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 RFNGQ9Y644 331 aa3.19□□□□□ -1.9
PTCD3-205ENST00000464541 IGLV1-50A0A075B6I6 118 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 KIR2DS1A0A191URI9 304 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 ANKRD65E5RJM6 399 aa3.18□□□□□ -1.9
PTCD3-205ENST00000464541 NME4O00746 187 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms