RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 LRCH1Q9Y2L9 728 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 DOCK11Q5JSL3 2073 aa12.12□□□□□ -0.47
SQSTM1-205ENST00000464493 ARHGAP32A7KAX9 2087 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 SYNGR1O43759 233 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 OCM2P0CE71 109 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 OCMP0CE72 109 aaPredicted RBP12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 PCMT1P22061 227 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 AZGP1P25311 298 aaKnown RBP12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 SOX2P48431 317 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 RBP2P50120 134 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 ATP1B3P54709 279 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 MTCP1P56278 107 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 IRF3Q14653 427 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 CALHM1Q8IU99 346 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 SPSB1Q96BD6 273 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 PKIBQ9C010 78 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 CCDC90BQ9GZT6 254 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 RASSF4Q9H2L5 321 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 RASL12Q9NYN1 266 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 BLOC1S6Q9UL45 172 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
SQSTM1-205ENST00000464493 PNMA8CA0A1B0GUJ8 204 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 A8MXK9 166 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 PHF1O43189 567 aaPredicted RBP12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 ADAM20O43506 726 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 NOS1APO75052 506 aaPredicted RBP12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 CRLF1O75462 422 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 ALX3O95076 343 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 MT-ND2P03891 347 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 CD2P06729 351 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 PGA5P0DJD9 388 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 CELP19835 753 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 EEF1B2P24534 225 aaKnown RBP12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 MPZP25189 248 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 PITPNBP48739 271 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 GNB2P62879 340 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 BDH1Q02338 343 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 ACSM1Q08AH1 577 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 IL24Q13007 206 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 DOC2BQ14184 412 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 SPHARQ15513 63 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 YIF1BQ5BJH7 314 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 FAHD2BQ6P2I3 314 aaPredicted RBP12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 ZNF841Q6ZN19 808 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 LHFPL2Q6ZUX7 228 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 PRSS48Q7RTY5 328 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 TMIGD2Q96BF3 282 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 FAHD2AQ96GK7 314 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 PGLYRP3Q96LB9 341 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 OPALINQ96PE5 141 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 OR5M11Q96RB7 305 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 SNTG1Q9NSN8 517 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 CLN8Q9UBY8 286 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 POLR3KQ9Y2Y1 108 aaPredicted RBP12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 LSM2Q9Y333 95 aaKnown RBP12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 WNK2Q9Y3S1 2297 aa12.1□□□□□ -0.47
SQSTM1-205ENST00000464493 PPIAL4CA0A0B4J2A2 164 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 A0A0G2JMP0 313 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 A0A0X1KG70 313 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 TMPRSS2O15393 492 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 SULT1B1O43704 296 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 CD1AP06126 327 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 NPY4RP50391 375 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 MED22Q15528 200 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 ATPAF1Q5TC12 328 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 WDR25Q64LD2 544 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 STUMQ69YW2 141 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 OR4M2Q8NGB6 313 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 OR13C5Q8NGS8 318 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 TMEM106AQ96A25 262 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 CCL13Q99616 98 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 BEX2Q9BXY8 128 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 SHARPINQ9H0F6 387 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 NLKQ9UBE8 527 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 CTSZQ9UBR2 303 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 LPAR3Q9UBY5 353 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 CDC42EP3Q9UKI2 254 aa12.09□□□□□ -0.47
SQSTM1-205ENST00000464493 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 OR2AT4A6NND4 320 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 NXPH2O95156 264 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 PLATP00750 562 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 GATA3P23771 443 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 RPS11P62280 158 aaKnown RBP eCLIP12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 CHRFAM7AQ494W8 412 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 Q499Y3 187 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 DCAF12L2Q5VW00 463 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 ZNF529Q6P280 563 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms