RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 TRBV5-5A0A0J9YX44 114 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 ZNF879B4DU55 563 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 AKR7A2O43488 359 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 FOXH1O75593 365 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 ZNF16P17020 682 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-204ENST00000463487 MPZP25189 248 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 PSMA1P25786 263 aaKnown RBP16.58■□□□□ 0.24
COL9A3-204ENST00000463487 IL2RGP31785 369 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 MAP2K4P45985 399 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 HNRNPA0Q13151 305 aaKnown RBP16.58■□□□□ 0.24
COL9A3-204ENST00000463487 MKXQ8IYA7 352 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 POC1AQ8NBT0 407 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 MSI2Q96DH6 328 aaKnown RBP16.58■□□□□ 0.24
COL9A3-204ENST00000463487 MGLLQ99685 303 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 SMR3AQ99954 134 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 ACOT13Q9NPJ3 140 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 ACANP16112 2415 aa16.58■□□□□ 0.24
COL9A3-204ENST00000463487 IGKV1-9A0A0C4DH69 117 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 NKX6-3A6NJ46 265 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 RHBDL1O75783 438 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 NXPH2O95156 264 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 TNFAIP8O95379 198 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 TGFAP01135 160 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 MSMBP08118 114 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 ACAA1P09110 424 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-204ENST00000463487 LIPKQ5VXJ0 399 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 ZNF773Q6PK81 442 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 FIP1L1Q6UN15 594 aaKnown RBP16.57■□□□□ 0.24
COL9A3-204ENST00000463487 SLC36A1Q7Z2H8 476 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 GLCCI1Q86VQ1 547 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 ANGPTL5Q86XS5 388 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 Q8IYB0 196 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 C19orf18Q8NEA5 215 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 OR13C5Q8NGS8 318 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 OR14A2Q96R54 314 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 TMED9Q9BVK6 235 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 DNTTIP1Q9H147 329 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 TMEM138Q9NPI0 162 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 TAS2R4Q9NYW5 299 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 KCNS2Q9ULS6 477 aa16.57■□□□□ 0.24
COL9A3-204ENST00000463487 TRAV20A0A0B4J274 112 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 F5H0A9 414 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 NOS1APO75052 506 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 PLATP00750 562 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 PGA5P0DJD9 388 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 CPEP16870 476 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 EGR1P18146 543 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 FSTP19883 344 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 RBMXP38159 391 aaKnown RBP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 POU3F4P49335 361 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 NPY4RP50391 375 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 GMFBP60983 142 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 RPS11P62280 158 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 GNB2P62879 340 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 EMX1Q04741 257 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 TPBGQ13641 420 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 SLC25A26Q70HW3 274 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 FAM90A1Q86YD7 464 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 CALHM1Q8IU99 346 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 CEP19Q96LK0 163 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 GPER1Q99527 375 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 SSBP3Q9BWW4 388 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 GSX1Q9H4S2 264 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-204ENST00000463487 YAE1D1Q9NRH1 226 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 NLKQ9UBE8 527 aa16.56■□□□□ 0.24
COL9A3-204ENST00000463487 IGHV3OR15-7A0A075B7D8 119 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 A8MV72 311 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-204ENST00000463487 FAM157AC9JC47 383 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 TRAPPC2LH3BP13 241 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 ADAM20O43506 726 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 SYNGR1O43759 233 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 GYPAP02724 150 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 WNT2P09544 360 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 PITPNBP48739 271 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 DVL1P1P54792 670 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-204ENST00000463487 KISS1Q15726 138 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 LURAP1LQ8IV03 231 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 SPARTQ8N0X7 666 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 PNLDC1Q8NA58 520 aaKnown RBP16.55■□□□□ 0.24
COL9A3-204ENST00000463487 NRIP2Q9BQI9 281 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 LPAR2Q9HBW0 351 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 VCX3AQ9NNX9 186 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 CLN8Q9UBY8 286 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 OR5V1Q9UGF6 321 aa16.55■□□□□ 0.24
COL9A3-204ENST00000463487 ZNF469Q96JG9 3925 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-204ENST00000463487 IGKV1-27A0A075B6S5 117 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 TMPRSS2O15393 492 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 ALDOBP05062 364 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 GATA3P23771 443 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 BDKRB2P30411 391 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 TGFBR2P37173 567 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 KRTAP1-1Q07627 177 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 PDZK1IP1Q13113 114 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 DOC2BQ14184 412 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 ACSM3Q53FZ2 586 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 ZNF529Q6P280 563 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 SAXO1Q8IYX7 474 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 ZSCAN4Q8NAM6 433 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-204ENST00000463487 TMEM186Q96B77 213 aa16.54■□□□□ 0.24
COL9A3-204ENST00000463487 MED30Q96HR3 178 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms