RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 CRYGSP22914 178 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 IGHV1-2P23083 117 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 CEACAM8P31997 349 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 OTX1P32242 354 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ARR3P36575 388 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 HTR5AP47898 357 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 P2RX3P56373 397 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 CAV3P56539 151 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 HNRNPA0Q13151 305 aaKnown RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 TWIST1Q15672 202 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 HIKESHIQ53FT3 197 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 PABPC1L2AQ5JQF8 200 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 AWAT2Q6E213 333 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 DRAM2Q6UX65 266 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 PRSS45Q7RTY3 260 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 DPPA2Q7Z7J5 298 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 NAA40Q86UY6 237 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF433Q8N7K0 673 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ASB5Q8WWX0 329 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SLC7A6Q92536 515 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ORAI1Q96D31 301 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF799Q96GE5 643 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 PGAM5Q96HS1 289 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 KCNS3Q9BQ31 491 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 C6orf62Q9GZU0 229 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 NXF2Q9GZY0 626 aaKnown RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SLITRK2Q9H156 845 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 OPN3Q9H1Y3 402 aaPredicted RBP6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SP140LQ9H930 580 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SLC17A5Q9NRA2 495 aa6.29□□□□□ -1.4
UBE4B-204ENST00000462658 SHANK1Q9Y566 2161 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 FLNCQ14315 2725 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 CACNA1CQ13936 2221 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 A0A1B0GTI1 187 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 IQCMA0A1B0GVH7 501 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 A0A1B0GVI7 797 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 SYT7O43581 403 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 RAD51DO75771 328 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 LYZL6O75951 148 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 TOMM40O96008 361 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 CD2P06729 351 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 COX5BP10606 129 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 PAX7P23759 505 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 BMXP51813 675 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 SELENOVP59797 346 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 UBE2NP61088 152 aaKnown RBP6.28□□□□□ -1.4
UBE4B-204ENST00000462658 GABRA6Q16445 453 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 MOGQ16653 247 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 KRTAP27-1Q3LI81 207 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 LINC00299Q6ZSB3 139 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 MOB3CQ70IA8 216 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 COMMD2Q86X83 199 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 CCDC36Q8IYA8 594 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 GABRG1Q8N1C3 465 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 NAXEQ8NCW5 288 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 OR8B12Q8NGG6 310 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 OR6Q1Q8NGQ2 317 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 OR13C3Q8NGS6 347 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 OR51E1Q8TCB6 317 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 AP3S1Q92572 193 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 TMEM106AQ96A25 262 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 SFXN3Q9BWM7 321 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 NOX3Q9HBY0 568 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 B3GNT2Q9NY97 397 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF319Q9P2F9 582 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 CRNNQ9UBG3 495 aaPredicted RBP6.28□□□□□ -1.4
UBE4B-204ENST00000462658 ATPIF1Q9UII2 106 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 TINAGQ9UJW2 476 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 AK6Q9Y3D8 172 aaKnown RBP6.28□□□□□ -1.4
UBE4B-204ENST00000462658 PEX16Q9Y5Y5 336 aa6.28□□□□□ -1.4
UBE4B-204ENST00000462658 MYO18BQ8IUG5 2567 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
UBE4B-204ENST00000462658 LOC100509620A0A075B734 347 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 A0A0U1RQV5 110 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 C5orf49A4QMS7 147 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 C5orf63A6NC05 138 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 ANKRD61A6NGH8 418 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 CTDSP2O14595 271 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 LCATP04180 440 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 ZNF12P17014 697 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 COX5AP20674 150 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 CCL1P22362 96 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 ANOS1P23352 680 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 CFL1P23528 166 aaKnown RBP6.27□□□□□ -1.41
UBE4B-204ENST00000462658 STOMP27105 288 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 S100A5P33763 92 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 OPRM1P35372 400 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 APLNRP35414 380 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 PEX19P40855 299 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 OR10A3P58181 314 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 VAMP2P63027 116 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 P2RY6Q15077 328 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 TSC22D1Q15714 1073 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 GSG1Q2KHT4 349 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 IDNKQ5T6J7 187 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 SFXN4Q6P4A7 337 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 STAC2Q6ZMT1 411 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 LRRTM1Q86UE6 522 aa6.27□□□□□ -1.41
UBE4B-204ENST00000462658 MDP1Q86V88 176 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms