RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PCGF1Q9BSM1 259 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 INPP5EQ9NRR6 644 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 MRPS18AQ9NVS2 196 aaKnown RBP18.61■□□□□ 0.57
TRAF4-207ENST00000461195 MYRFQ9Y2G1 1151 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 SYNGR1O43759 233 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 TOX4O94842 621 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 SERPINA3P01011 423 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 TFF1P04155 84 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 ISG15P05161 165 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 ACAA1P09110 424 aaPredicted RBP18.6■□□□□ 0.57
TRAF4-207ENST00000461195 PSG2P11465 335 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 PEX2P28328 305 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 GABRA2P47869 451 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 CCR9P51686 369 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 NANOS3P60323 173 aaKnown RBP18.6■□□□□ 0.57
TRAF4-207ENST00000461195 UBE2V2Q15819 145 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 KLHL22Q53GT1 634 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 METTL11BQ5VVY1 283 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 C9orf139Q6ZV77 190 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 EGFL6Q8IUX8 553 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 SIGLECL1Q8N7X8 197 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 TRMT10AQ8TBZ6 339 aaKnown RBP18.6■□□□□ 0.57
TRAF4-207ENST00000461195 WDFY2Q96P53 400 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 CHST5Q9GZS9 411 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 CNTD2Q9H8S5 307 aa18.6■□□□□ 0.57
TRAF4-207ENST00000461195 IGKV1D-17A0A075B6S4 117 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 FAM230AA0A1W2PPH8 454 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 ANKRD65E5RJM6 399 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 SIGLEC5O15389 551 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 NOS1APO75052 506 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-207ENST00000461195 SFTPBP07988 381 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 PGA5P0DJD9 388 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 SELLP14151 372 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 MMP9P14780 707 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 MPZP25189 248 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 DGUOKQ16854 277 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 SMIM21Q3B7S5 101 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 GPR157Q5UAW9 335 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 ZNF691Q5VV52 312 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 TTC23Q5W5X9 447 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 ACP7Q6ZNF0 438 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 SYS1Q8N2H4 156 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-207ENST00000461195 LY6G5BQ8NDX9 201 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 OR52I1Q8NGK6 324 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 NPRL2Q8WTW4 380 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 CYGBQ8WWM9 190 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 PP6455Q8WZ26 134 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 ZNF488Q96MN9 340 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 PKIBQ9C010 78 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 ESM1Q9NQ30 184 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 ERVK13-1Q9NX77 482 aa18.59■□□□□ 0.57
TRAF4-207ENST00000461195 SLC25A10Q9UBX3 287 aaPredicted RBP18.59■□□□□ 0.57
TRAF4-207ENST00000461195 WBP4O75554 376 aaKnown RBP18.58■□□□□ 0.56
TRAF4-207ENST00000461195 FUT6P51993 359 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 BPIFB3P59826 476 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 ARF6P62330 175 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 ALKBH1Q13686 389 aaKnown RBP18.58■□□□□ 0.56
TRAF4-207ENST00000461195 ANGPTL5Q86XS5 388 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 ZDHHC22Q8N966 263 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 FAM216AQ8WUB2 273 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 H1FXQ92522 213 aaKnown RBP18.58■□□□□ 0.56
TRAF4-207ENST00000461195 DMRTB1Q96MA1 342 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 TBX15Q96SF7 602 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 DCTN5Q9BTE1 182 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 SIRPDQ9H106 197 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 ISG20L2Q9H9L3 353 aaKnown RBP18.58■□□□□ 0.56
TRAF4-207ENST00000461195 ZNF222Q9UK12 451 aa18.58■□□□□ 0.56
TRAF4-207ENST00000461195 NXPH2O95156 264 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 CLIC3O95833 236 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 CAV3P56539 151 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 IL24Q13007 206 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 PDCD1Q15116 288 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 CNN3Q15417 329 aaKnown RBP18.57■□□□□ 0.56
TRAF4-207ENST00000461195 SMN1Q16637 294 aaKnown RBP18.57■□□□□ 0.56
TRAF4-207ENST00000461195 CALHM1Q8IU99 346 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 DHRSXQ8N5I4 330 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 ADAT3Q96EY9 351 aaPredicted RBP18.57■□□□□ 0.56
TRAF4-207ENST00000461195 ZNF48Q96MX3 618 aaPredicted RBP18.57■□□□□ 0.56
TRAF4-207ENST00000461195 NRIP2Q9BQI9 281 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 ZNF649Q9BS31 505 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 HHLA2Q9UM44 414 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 KPTNQ9Y664 436 aa18.57■□□□□ 0.56
TRAF4-207ENST00000461195 OR4C45A6NMZ5 311 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 ZNF20P17024 532 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 NDUFB7P17568 137 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 MRPL28Q13084 256 aaKnown RBP18.56■□□□□ 0.56
TRAF4-207ENST00000461195 BRD3OSQ6XYD6 125 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 ZNF676Q8N7Q3 588 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 SETD9Q8NE22 299 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 C8orf46Q8TAG6 207 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 CNIH3Q8TBE1 160 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 FGGYQ96C11 551 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 BORCS8Q96FH0 119 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 SDSLQ96GA7 329 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 FGF20Q9NP95 211 aaPredicted RBP18.56■□□□□ 0.56
TRAF4-207ENST00000461195 ONECUT1Q9UBC0 465 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 MAB21L2Q9Y586 359 aa18.56■□□□□ 0.56
TRAF4-207ENST00000461195 RFPL4AA6NLU0 287 aa18.55■□□□□ 0.56
TRAF4-207ENST00000461195 RFPL4AL1F8VTS6 287 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms