RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 HAGHLQ6PII5 290 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-204ENST00000452182 WDR82Q6UXN9 313 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 TPRA1Q86W33 373 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 C1orf87Q8N0U7 546 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 OR11L1Q8NGX0 322 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 ZNF420Q8TAQ5 688 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-204ENST00000452182 ZNF671Q8TAW3 534 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 CCL17Q92583 94 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 RPL3LQ92901 407 aaKnown RBP9.76□□□□□ -0.85
SCN9A-204ENST00000452182 UQCC2Q9BRT2 126 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 CENPOQ9BU64 300 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 TMEM106BQ9NUM4 274 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 C1orf123Q9NWV4 160 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 CACNG2Q9Y698 323 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 FLNBO75369 2602 aaKnown RBP9.76□□□□□ -0.85
SCN9A-204ENST00000452182 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
SCN9A-204ENST00000452182 IGHV3-64DA0A0J9YX35 117 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 LOC100506127A0A0U1RQW1 187 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 TMEM178BH3BS89 294 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 SSX4O60224 188 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 IRF2P14316 349 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 ZP1P60852 638 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 PDZK1IP1Q13113 114 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 GLT8D1Q68CQ7 371 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 SLC16A12Q6ZSM3 486 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 SATL1Q86VE3 508 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 ANGPTL5Q86XS5 388 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 MKXQ8IYA7 352 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 SAXO1Q8IYX7 474 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 ZSCAN4Q8NAM6 433 aaPredicted RBP9.75□□□□□ -0.85
SCN9A-204ENST00000452182 SPACA5Q96QH8 159 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 BCL7BQ9BQE9 202 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 CSMD1Q96PZ7 3565 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 ARID1AO14497 2285 aa9.75□□□□□ -0.85
SCN9A-204ENST00000452182 SHISA3A0PJX4 238 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 SRRM5B3KS81 715 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 CLDN25C9JDP6 229 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 LYNX1G3V0Z9 82 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 PDCD5O14737 125 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 PGA5P0DJD9 388 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 LYNX1P0DP58 116 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 CFPP27918 469 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 PDLIM4P50479 330 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 RIN1Q13671 783 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 BLMHQ13867 455 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 CTF1Q16619 201 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 GPR107Q5VW38 600 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 ZNF826PQ6ZT77 177 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 RNF144BQ7Z419 303 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 TGIF2LYQ8IUE0 185 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 GCSAMQ8N6F7 178 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 ZNF525Q8N782 197 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 PNLDC1Q8NA58 520 aaKnown RBP9.74□□□□□ -0.85
SCN9A-204ENST00000452182 PXT1Q8NFP0 134 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 GPER1Q99527 375 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 VPS13CQ709C8 3753 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 hCG_1807616A0A1W2PRN6 198 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 SYNGR1O43759 233 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 RHBDL1O75783 438 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 CYB5AP00167 134 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 PTGFRP43088 359 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 TMBIM6P55061 237 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 ERVK11-1P61568 191 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 C1orf100Q5SVJ3 147 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 SHEQ5VZ18 495 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 CLEC2AQ6UVW9 174 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 ASCL4Q6XD76 172 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 SLC25A26Q70HW3 274 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 Q8IYB0 196 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 JAGN1Q8N5M9 183 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 POC1AQ8NBT0 407 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 OR51F2Q8NH61 342 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 RAB2BQ8WUD1 216 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 LRRC29Q8WV35 223 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 FAM168AQ92567 244 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 GFI1Q99684 422 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 NRIP2Q9BQI9 281 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 RASL12Q9NYN1 266 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 TREM2Q9NZC2 230 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 MTCH1Q9NZJ7 389 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 NPTNQ9Y639 398 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 V9GY05 133 aa9.74□□□□□ -0.85
SCN9A-204ENST00000452182 KDM4BO94953 1096 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 CYB5R3P00387 301 aaPredicted RBP9.73□□□□□ -0.85
SCN9A-204ENST00000452182 RAB3BP20337 219 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 SDC2P34741 201 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 RANBP1P43487 201 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 POU3F4P49335 361 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 Q5PR19 223 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 FAM166AQ6J272 317 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 PEG10Q86TG7 708 aaKnown RBP9.73□□□□□ -0.85
SCN9A-204ENST00000452182 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 CLVS1Q8IUQ0 354 aaPredicted RBP9.73□□□□□ -0.85
SCN9A-204ENST00000452182 Q8NFD4 153 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 OR6M1Q8NGM8 313 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 C10orf105Q8TEF2 133 aa9.73□□□□□ -0.85
SCN9A-204ENST00000452182 TNFAIP8L1Q8WVP5 186 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms