RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TMEM212A6NML5 194 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 FAM157AC9JC47 383 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 INAFM1C9JVW0 142 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 MAGEB3O15480 346 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 GATBO75879 557 aaKnown RBP7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF205O95201 554 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 LHBP01229 141 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 WNT2P09544 360 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF16P17020 682 aaPredicted RBP7.45□□□□□ -1.22
COL8A1-203ENST00000452013 HNF1AP20823 631 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 GALP22466 123 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 THBS2P35442 1172 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 KIR3DL2P43630 455 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ETV1P50549 477 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 GPM6AP51674 278 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 FUT6P51993 359 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 RIPPLY3P57055 190 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 NANOS3P60323 173 aaKnown RBP7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF154Q13106 437 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 CEP78Q5JTW2 689 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 TMEM42Q69YG0 159 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF826PQ6ZT77 177 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 NLRC3Q7RTR2 1065 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF573Q86YE8 665 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 C11orf53Q8IXP5 236 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 RDH10Q8IZV5 341 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 TEX29Q8N6K0 151 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 SCCPDHQ8NBX0 429 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 DEFB108BQ8NET1 73 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 OR5AK2Q8NH90 309 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 LRRC29Q8WV35 223 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 PP6455Q8WZ26 134 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 RPL3LQ92901 407 aaKnown RBP7.45□□□□□ -1.22
COL8A1-203ENST00000452013 TMEM186Q96B77 213 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 NEIL1Q96FI4 390 aaPredicted RBP7.45□□□□□ -1.22
COL8A1-203ENST00000452013 WDFY2Q96P53 400 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 TMEM246Q9BRR3 403 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 BEX2Q9BXY8 128 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 TLNRD1Q9H1K6 362 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 PPP1R3EQ9H7J1 279 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 GPR173Q9NS66 373 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 LPAR3Q9UBY5 353 aa7.45□□□□□ -1.22
COL8A1-203ENST00000452013 USF3Q68DE3 2245 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 LOC107986453A0A1B0GWG9 222 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 ANKRD61A6NGH8 418 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 A6NIN4 97 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 OR4C45A6NMZ5 311 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 CEACAM18A8MTB9 384 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 C3orf80F5H4A9 247 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 PLPP2O43688 288 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 CRLF1O75462 422 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 IL1AP01583 271 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 RPS2P15880 293 aaKnown RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 MUC1P15941 1255 aaPredicted RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF20P17024 532 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 GATA3P23771 443 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 GADD45AP24522 165 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 PTBP1P26599 531 aaKnown RBP eCLIP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 C21orf33P30042 268 aaPredicted RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 RORCP51449 518 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 CBX3Q13185 183 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 CNN3Q15417 329 aaKnown RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 MICBQ29980 383 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 ESCO2Q56NI9 601 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 FAM201AQ5SY85 155 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 SFRP4Q6FHJ7 346 aaPredicted RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 WDR82Q6UXN9 313 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 WDR86Q86TI4 376 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 GCSAMQ8N6F7 178 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 OR8B3Q8NGG8 313 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 OR13C3Q8NGS6 347 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 OR52N1Q8NH53 320 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 HPSE2Q8WWQ2 592 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 GATAD2BQ8WXI9 593 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 AP3S1Q92572 193 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 RNF166Q96A37 237 aaPredicted RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 FGGYQ96C11 551 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 CEP19Q96LK0 163 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 OR8B2Q96RD0 313 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 SHARPINQ9H0F6 387 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 OR51I2Q9H344 312 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 METTL17Q9H7H0 456 aaPredicted RBP7.44□□□□□ -1.22
COL8A1-203ENST00000452013 LPAR2Q9HBW0 351 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 HIF1ANQ9NWT6 349 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 RASL12Q9NYN1 266 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 CDC42EP3Q9UKI2 254 aa7.44□□□□□ -1.22
COL8A1-203ENST00000452013 HEATR1Q9H583 2144 aaKnown RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 AKAP6Q13023 2319 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 PPIAL4CA0A0B4J2A2 164 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 FAM230AA0A1W2PPH8 454 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 PQLC2LA1A4F0 135 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 E9PI62 339 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 F5H0A9 414 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 H3BSH0 61 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 J3QLI3 93 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 MYL12BO14950 172 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 OGG1O15527 345 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 ZFPL1O95159 310 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 ACAA1P09110 424 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 TRAPPC2P0DI81 140 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms