RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ZNF671Q8TAW3 534 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 NANPQ8TBE9 248 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 TFAP2CQ92754 450 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 GGHQ92820 318 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 TMIGD2Q96BF3 282 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 C12orf43Q96C57 262 aaKnown RBP12.3□□□□□ -0.44
HDAC4-204ENST00000446876 GAFA1Q96PS6 74 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 PDCD1LG2Q9BQ51 273 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 CLEC2DQ9UHP7 191 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 HHLA2Q9UM44 414 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 SLC7A11Q9UPY5 501 aa12.3□□□□□ -0.44
HDAC4-204ENST00000446876 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 OR2AT4A6NND4 320 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 ENSAO43768 121 aaKnown RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 GATBO75879 557 aaKnown RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 INMTO95050 263 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 ZFPL1O95159 310 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 PGA5P0DJD9 388 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 PSG2P11465 335 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 GABRA2P47869 451 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 GBX2P52951 348 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 ACP7Q6ZNF0 438 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 BTN2A1Q7KYR7 527 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 FBLIM1Q8WUP2 373 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 MYCBPQ99417 103 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 SLC6A7Q99884 636 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 DIMT1Q9UNQ2 313 aaKnown RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 HSPE1-MOB4S4R3N1 261 aa12.29□□□□□ -0.44
HDAC4-204ENST00000446876 FBN1P35555 2871 aaKnown RBP12.29□□□□□ -0.44
HDAC4-204ENST00000446876 ATRQ13535 2644 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 IRGMA1A4Y4 181 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 IGHV4-38-2P0DP08 117 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 MPZP25189 248 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 TGM4P49221 684 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 FGF12P61328 243 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 DGUOKQ16854 277 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 ATPAF1Q5TC12 328 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-204ENST00000446876 ZNF788Q6ZQV5 615 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 AHSA2Q719I0 299 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 RNF144BQ7Z419 303 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 TEX29Q8N6K0 151 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 BPIFB6Q8NFQ5 453 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 PP6455Q8WZ26 134 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 RGP1Q92546 391 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-204ENST00000446876 C10orf35Q96D05 121 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 BORCS8Q96FH0 119 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 TMEM80Q96HE8 168 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 NRIP2Q9BQI9 281 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 ELL3Q9HB65 397 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-204ENST00000446876 ZNF222Q9UK12 451 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 POLDIP2Q9Y2S7 368 aa12.28□□□□□ -0.44
HDAC4-204ENST00000446876 CAB39Q9Y376 341 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-204ENST00000446876 EXOSC1Q9Y3B2 195 aaKnown RBP12.28□□□□□ -0.44
HDAC4-204ENST00000446876 SIRT4Q9Y6E7 314 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-204ENST00000446876 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 TRBV2A0A0J9YWF9 115 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 TMEM212A6NML5 194 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 RNF212BA8MTL3 300 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 F8VVB4 439 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 F8VWA3 439 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 H0YHG0 523 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 NDUFB3O43676 98 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 TCF21O43680 179 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 NXPH2O95156 264 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 LALBAP00709 142 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 SERPINA3P01011 423 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 SFTPBP07988 381 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 CCDC159P0C7I6 412 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 ATF1P18846 271 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 MYL12AP19105 171 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 AZGP1P25311 298 aaKnown RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 FUT6P51993 359 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 IL13RA1P78552 427 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 ST3GAL4Q11206 333 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 MRPL28Q13084 256 aaKnown RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 CNN3Q15417 329 aaKnown RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 KRTAP24-1Q3LI83 254 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 CD276Q5ZPR3 534 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 TMPRSS11AQ6ZMR5 421 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 OR13C9Q8NGT0 318 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 OR5AK2Q8NH90 309 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 TSEN15Q8WW01 171 aaKnown RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 SLAMF9Q96A28 289 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 RFT1Q96AA3 541 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 SPACA5Q96QH8 159 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 PKIBQ9C010 78 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 COMMD4Q9H0A8 199 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 ZNF69Q9UC07 566 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 MAB21L2Q9Y586 359 aa12.27□□□□□ -0.45
HDAC4-204ENST00000446876 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-204ENST00000446876 EFCAB10A6NFE3 127 aa12.26□□□□□ -0.45
HDAC4-204ENST00000446876 RFPL4AA6NLU0 287 aa12.26□□□□□ -0.45
HDAC4-204ENST00000446876 RFPL4AL1F8VTS6 287 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms