RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZMYND19Q96E35 227 aaPredicted RBP1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SEH1LQ96EE3 360 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 FMC1Q96HJ9 113 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF514Q96K75 400 aaPredicted RBP1.67□□□□□ -2.14
PTPN4-205ENST00000433888 FAM210BQ96KR6 192 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 ZFP3Q96NJ6 502 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 TRNT1Q96Q11 434 aaKnown RBP1.67□□□□□ -2.14
PTPN4-205ENST00000433888 MARVELD1Q9BSK0 173 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 NUDT9Q9BW91 350 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SLC19A3Q9BZV2 496 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 TPK1Q9H3S4 243 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 FBXO6Q9NRD1 293 aaPredicted RBP1.67□□□□□ -2.14
PTPN4-205ENST00000433888 HEBP1Q9NRV9 189 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CA10Q9NS85 328 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 MAT2BQ9NZL9 334 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 ANXA10Q9UJ72 324 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SLC22A14Q9Y267 594 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF835Q9Y2P0 537 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SNX24Q9Y343 169 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 AQRO60306 1485 aaKnown RBP eCLIP1.67□□□□□ -2.14
PTPN4-205ENST00000433888 FHOD3Q2V2M9 1422 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 LOC102724200A0A096LPH7 203 aaPredicted RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 FABP12A6NFH5 140 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 OR5H1A6NKK0 313 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 GOLGA8JA6NMD2 632 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 H0YJW9 148 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 H3BP45 60 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 GOLGA8RI6L899 631 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 MANBAO00462 879 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CCDC22O60826 627 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 SPAG7O75391 227 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ZMPSTE24O75844 475 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 PTHP01270 115 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 IGLV2-8P01709 118 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 HLA-DQB1P01920 261 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 RLN2P04090 185 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 OR5AL1P0C617 328 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 GOLGA8HP0CJ92 632 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 IGHV1-8P0DP01 117 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CD28P10747 220 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CXCR1P25024 350 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CD40LGP29965 261 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 GRPRP30550 384 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 XKP51811 444 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ESRRGP62508 458 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 GRB2P62993 217 aaKnown RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ARG2P78540 354 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 PIGHQ14442 188 aaPredicted RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 IRF4Q15306 451 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 TRIP13Q15645 432 aaPredicted RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CHRFAM7AQ494W8 412 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 KRTAP13-2Q52LG2 175 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 C5orf47Q569G3 176 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 TTC32Q5I0X7 151 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 AVPI1Q5T686 147 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 XKRXQ6PP77 449 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 MDP1Q86V88 176 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 FUNDC1Q8IVP5 155 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 GAPTQ8N292 157 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 TMEM256Q8N2U0 113 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF615Q8N8J6 731 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 C15orf56Q8N910 161 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 OR2L8Q8NGY9 312 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF420Q8TAQ5 688 aaPredicted RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 NT5CQ8TCD5 201 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 DOK4Q8TEW6 326 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 DNAJB3Q8WWF6 145 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 TNFRSF14Q92956 283 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 HGDQ93099 445 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CCDC127Q96BQ5 260 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 FXYD5Q96DB9 178 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 METTL26Q96S19 204 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 CAMK2N2Q96S95 79 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 VAT1Q99536 393 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 C7orf50Q9BRJ6 194 aaKnown RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 TMED9Q9BVK6 235 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ANGPTL4Q9BY76 406 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 IFI27L2Q9H2X8 130 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ABCB9Q9NP78 766 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 RBM12B-AS1Q9P1G2 102 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 OR12D3Q9UGF7 316 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 AP3M1Q9Y2T2 418 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 LRRC42Q9Y546 428 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF706Q9Y5V0 76 aaPredicted RBP1.66□□□□□ -2.14
PTPN4-205ENST00000433888 ABCB11O95342 1321 aa1.66□□□□□ -2.14
PTPN4-205ENST00000433888 IGHV1OR15-9A0A0B4J2B8 117 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 F8VP50 259 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 PRAMEF26H0Y7S4 382 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 CDIPTO14735 213 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 MPZL2O60487 215 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SNAP29O95721 258 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 ASS1P00966 412 aaKnown RBP1.65□□□□□ -2.15
PTPN4-205ENST00000433888 CD8AP01732 235 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 APCSP02743 223 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 MT-ND4P03905 459 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 KDELR2P33947 212 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 SPAM1P38567 509 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 KCNJ3P48549 501 aa1.65□□□□□ -2.15
PTPN4-205ENST00000433888 DNASE1L1P49184 302 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms