RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MYL12AP19105 171 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 PCMT1P22061 227 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 CCL1P22362 96 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 DCKP27707 260 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 GABRA2P47869 451 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 SOX2P48431 317 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 PITPNBP48739 271 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 CCR9P51686 369 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 AQP4P55087 323 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ACTA2P62736 377 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 GNG3P63215 75 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ACTG2P63267 376 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ST3GAL4Q11206 333 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 IL18R1Q13478 541 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 MICBQ29980 383 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANKRD39Q53RE8 183 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 FAM76BQ5HYJ3 339 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMEM244Q5VVB8 128 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 WDR25Q64LD2 544 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 LAIR2Q6ISS4 152 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMPRSS11AQ6ZMR5 421 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF841Q6ZN19 808 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 AHSA2Q719I0 299 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 RNF144BQ7Z419 303 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 CALHM1Q8IU99 346 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 STX19Q8N4C7 294 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 FAM216BQ8N7L0 139 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZFP41Q8N8Y5 198 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR4M2Q8NGB6 313 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR51A4Q8NGJ6 313 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR13C3Q8NGS6 347 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR5AK2Q8NH90 309 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF671Q8TAW3 534 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 RAB40AQ8WXH6 277 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 C22orf15Q8WYQ4 148 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ST8SIA4Q92187 359 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 AQP3Q92482 292 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TFAP2CQ92754 450 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMIGD2Q96BF3 282 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ADAT3Q96EY9 351 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 MRPL48Q96GC5 212 aaKnown RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 MYCBPQ99417 103 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 PDCD1LG2Q9BQ51 273 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF649Q9BS31 505 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ABCB9Q9NP78 766 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 FGF20Q9NP95 211 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 MRPS18AQ9NVS2 196 aaKnown RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 CHCHD3Q9NX63 227 aaKnown RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR14J1Q9UGF5 321 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR5V1Q9UGF6 321 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 INSIG2Q9Y5U4 225 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 AUP1Q9Y679 476 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 SIRT4Q9Y6E7 314 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 IGKV1-27A0A075B6S5 117 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 KIR2DS1A0A191URI9 304 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 PNMA8CA0A1B0GUJ8 204 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 A0A1W2PPK0 400 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 PQLC2LA1A4F0 135 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANKRD34BA5PLL1 514 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR5B21A6NL26 309 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR4C45A6NMZ5 311 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR2AT4A6NND4 320 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SRRM5B3KS81 715 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 F8VVB4 439 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 F8VWA3 439 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SPRY1O43609 319 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 NDUFA2O43678 99 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 FCN3O75636 299 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZFPL1O95159 310 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 LALBAP00709 142 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ISG15P05161 165 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 RPSAP08865 295 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 UBCP0CG48 685 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SELLP14151 372 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 MUC1P15941 1255 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF12P17014 697 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ATF1P18846 271 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 AMY2BP19961 511 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 C21orf33P30042 268 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 CEBPDP49716 269 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 FUT6P51993 359 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ATP1B3P54709 279 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SNU13P55769 128 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 MTCP1P56278 107 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ARF6P62330 175 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 KCNJ8Q15842 424 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 TEX36Q5VZQ5 186 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMEM42Q69YG0 159 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 BTN2A1Q7KYR7 527 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 KRT74Q7RTS7 529 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SATL1Q86VE3 508 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF573Q86YE8 665 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 EGFL6Q8IUX8 553 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SYS1Q8N2H4 156 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNRF1Q8ND25 227 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms