RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NEK6Q9HC98 313 aa20.5■□□□□ 0.87
VEGFA-209ENST00000425836 POLDIP2Q9Y2S7 368 aa20.5■□□□□ 0.87
VEGFA-209ENST00000425836 SF3B6Q9Y3B4 125 aaKnown RBP20.5■□□□□ 0.87
VEGFA-209ENST00000425836 GPX5O75715 221 aa20.49■□□□□ 0.87
VEGFA-209ENST00000425836 IGHV2-5P01817 119 aa20.49■□□□□ 0.87
VEGFA-209ENST00000425836 IGFBP3P17936 291 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-209ENST00000425836 RPS25P62851 125 aaKnown RBP20.49■□□□□ 0.87
VEGFA-209ENST00000425836 IL24Q13007 206 aa20.49■□□□□ 0.87
VEGFA-209ENST00000425836 SSX1Q16384 188 aa20.49■□□□□ 0.87
VEGFA-209ENST00000425836 CRIP3Q6Q6R5 217 aa20.49■□□□□ 0.87
VEGFA-209ENST00000425836 NOX4Q9NPH5 578 aa20.49■□□□□ 0.87
VEGFA-209ENST00000425836 FLNAP21333 2647 aaKnown RBP20.48■□□□□ 0.87
VEGFA-209ENST00000425836 TRAV8-7A0A075B6U6 113 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 IGHV3OR15-7A0A075B7D8 119 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 TRAV38-1A0A0B4J264 116 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 CEACAM18A8MTB9 384 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 SC5DO75845 299 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 INMTO95050 263 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 PLATP00750 562 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 HCKP08631 526 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 IGHV4-31P0DP07 118 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 TGFBR2P37173 567 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 POC1AQ8NBT0 407 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 THRSPQ92748 146 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 RFT1Q96AA3 541 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 C1orf159Q96HA4 380 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 ZNF488Q96MN9 340 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 ZNF696Q9H7X3 374 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 PCDHB10Q9UN67 800 aa20.48■□□□□ 0.87
VEGFA-209ENST00000425836 NOS1APO75052 506 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-209ENST00000425836 HEXAP06865 529 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 PGA5P0DJD9 388 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 FSTP19883 344 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 MAPK3P27361 379 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-209ENST00000425836 PSMB9P28065 219 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 PPP3R1P63098 170 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 KRTAP1-1Q07627 177 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 SLC25A26Q70HW3 274 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 FAM90A1Q86YD7 464 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 TSPAN14Q8NG11 270 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 PATZ1Q9HBE1 687 aaKnown RBP20.47■□□□□ 0.87
VEGFA-209ENST00000425836 CKLFQ9UBR5 152 aa20.47■□□□□ 0.87
VEGFA-209ENST00000425836 TNFRSF13BO14836 293 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-209ENST00000425836 ACAA1P09110 424 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-209ENST00000425836 MUC1P15941 1255 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-209ENST00000425836 GLRA1P23415 457 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 POU3F4P49335 361 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 TRAM1Q15629 374 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 KISS1Q15726 138 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 MICBQ29980 383 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 TMEM91Q6ZNR0 172 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 CEACAM19Q7Z692 300 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 OR52N4Q8NGI2 321 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 RAB39BQ96DA2 213 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 NRIP2Q9BQI9 281 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 TMEM138Q9NPI0 162 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 MTCH1Q9NZJ7 389 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 FOXJ3Q9UPW0 622 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 A0A087WXM4 84 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 FAM157AC9JC47 383 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 MAGEB3O15480 346 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 GYPAP02724 150 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 ALDOBP05062 364 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 PSMA1P25786 263 aaKnown RBP20.46■□□□□ 0.87
VEGFA-209ENST00000425836 BDKRB2P30411 391 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 GABRA5P31644 462 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 GZMKP49863 264 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 PDZK1IP1Q13113 114 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 KCNJ8Q15842 424 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 FAM27D1Q5T7N8 215 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 LYPD2Q6UXB3 125 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 DCDC5Q6ZRR9 648 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 BIVMQ86UB2 503 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 DNAJB11Q9UBS4 358 aa20.46■□□□□ 0.87
VEGFA-209ENST00000425836 F5H0A9 414 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 WNT2P09544 360 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 GP2P55259 537 aaKnown RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 ERVK11-1P61568 191 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 BATF2Q8N1L9 274 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 OR5T2Q8NGG2 359 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 OR5D18Q8NGL1 313 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 SLAMF9Q96A28 289 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 TMIGD2Q96BF3 282 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 C12orf43Q96C57 262 aaKnown RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 MSI2Q96DH6 328 aaKnown RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 NR1H4Q96RI1 486 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 PPIL3Q9H2H8 161 aaKnown RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 GSX1Q9H4S2 264 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-209ENST00000425836 SNTG1Q9NSN8 517 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 NDUFB11Q9NX14 153 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 RASL12Q9NYN1 266 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 MIOXQ9UGB7 285 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 ACANP16112 2415 aa20.45■□□□□ 0.86
VEGFA-209ENST00000425836 MAGEA13PA6NCF6 341 aa20.44■□□□□ 0.86
VEGFA-209ENST00000425836 SPRY1O43609 319 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-209ENST00000425836 NDUFA2O43678 99 aa20.44■□□□□ 0.86
VEGFA-209ENST00000425836 LY6G6DO95868 133 aa20.44■□□□□ 0.86
VEGFA-209ENST00000425836 ZP1P60852 638 aa20.44■□□□□ 0.86
VEGFA-209ENST00000425836 FABP5Q01469 135 aa20.44■□□□□ 0.86
VEGFA-209ENST00000425836 NEDD8Q15843 81 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms