RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 YTHDF1Q9BYJ9 559 aaKnown RBP19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 TMEM160Q9NX00 188 aa19.31■□□□□ 0.68
SMARCB1-205ENST00000417137 ABCA1O95477 2261 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 MT-ND2P03891 347 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 CELP19835 753 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 AZGP1P25311 298 aaKnown RBP19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 SOX2P48431 317 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 MTCP1P56278 107 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 IL24Q13007 206 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 MED22Q15528 200 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 ANGPTL5Q86XS5 388 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 FAM90A1Q86YD7 464 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 OR13C9Q8NGT0 318 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 TMIGD2Q96BF3 282 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 HIF1ANQ9NWT6 349 aa19.3■□□□□ 0.68
SMARCB1-205ENST00000417137 IGKV1-9A0A0C4DH69 117 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 ADAM20O43506 726 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 GYPAP02724 150 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 ACAA1P09110 424 aaPredicted RBP19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 MPZP25189 248 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 GMFBP60983 142 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 GNB2P62879 340 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 HOXA4Q00056 320 aaPredicted RBP19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 POC1AQ8NBT0 407 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 RGP1Q92546 391 aaPredicted RBP19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 TMEM106AQ96A25 262 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 OPALINQ96PE5 141 aa19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 SSBP3Q9BWW4 388 aaPredicted RBP19.29■□□□□ 0.68
SMARCB1-205ENST00000417137 IGHV3OR15-7A0A075B7D8 119 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 PNMA8CA0A1B0GUJ8 204 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 INAFM1C9JVW0 142 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 TNFRSF13BO14836 293 aaPredicted RBP19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 MAGEB3O15480 346 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 SULT1B1O43704 296 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 MRPS14O60783 128 aaKnown RBP19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 NOS1APO75052 506 aaPredicted RBP19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 CYB5AP00167 134 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 RAB3AP20336 220 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 GATA3P23771 443 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 PITPNBP48739 271 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 NPY4RP50391 375 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 GABARAPL2P60520 117 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 LCN2P80188 198 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 LYPD2Q6UXB3 125 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 SLC36A1Q7Z2H8 476 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 CALHM1Q8IU99 346 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 THRSPQ92748 146 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 PGLYRP3Q96LB9 341 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 OR5M11Q96RB7 305 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 WDR13Q9H1Z4 485 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 KAAG1Q9UBP8 84 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 CLN8Q9UBY8 286 aa19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 LSM2Q9Y333 95 aaKnown RBP19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 YLPM1P49750 1951 aaKnown RBP19.28■□□□□ 0.68
SMARCB1-205ENST00000417137 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 SYNGR1O43759 233 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 PGA5P0DJD9 388 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 GPR50Q13585 617 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 SMIM21Q3B7S5 101 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 Q499Y3 187 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 ATPAF1Q5TC12 328 aaPredicted RBP19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 MKXQ8IYA7 352 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 MS4A15Q8N5U1 240 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 CPNE2Q96FN4 548 aaPredicted RBP19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 DNTTIP1Q9H147 329 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 ISYNA1Q9NPH2 558 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 NLKQ9UBE8 527 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 OR5V1Q9UGF6 321 aa19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 POLR3KQ9Y2Y1 108 aaPredicted RBP19.27■□□□□ 0.68
SMARCB1-205ENST00000417137 IGKV1-27A0A075B6S5 117 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 PPIAL4CA0A0B4J2A2 164 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 A0A0G2JMP0 313 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 TRBV5-5A0A0J9YX44 114 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 A0A0X1KG70 313 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 A8MXK9 166 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 TMPRSS2O15393 492 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 NXPH2O95156 264 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 HCKP08631 526 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 HNF1AP20823 631 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 ZFP36P26651 326 aaKnown RBP19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 PPP3R1P63098 170 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 OR4M2Q8NGB6 313 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 MED30Q96HR3 178 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 CKLFQ9UBR5 152 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 LPAR3Q9UBY5 353 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 HIVEP2P31629 2446 aa19.26■□□□□ 0.67
SMARCB1-205ENST00000417137 NKX6-3A6NJ46 265 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 OR2AT4A6NND4 320 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 PHF1O43189 567 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 SEC61A1P61619 476 aaKnown RBP19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 CR1LQ2VPA4 569 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 DCAF12L2Q5VW00 463 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 WDR25Q64LD2 544 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 STUMQ69YW2 141 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 FAHD2BQ6P2I3 314 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 ACP7Q6ZNF0 438 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 SLC25A26Q70HW3 274 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 OR5T2Q8NGG2 359 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 UFD1Q92890 307 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 SEH1LQ96EE3 360 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms