RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 UCP2P55851 309 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 TMEM33P57088 247 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 METAP1DQ6UB28 335 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 LRP11Q86VZ4 500 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 OR6M1Q8NGM8 313 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 ZNF671Q8TAW3 534 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 TRMT10AQ8TBZ6 339 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 UQCC2Q9BRT2 126 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 TAAR3PQ9P1P4 343 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 FZR1Q9UM11 496 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 PIGLQ9Y2B2 252 aa14.37□□□□□ -0.11
SCAMP4-204ENST00000414057 MAGEB3O15480 346 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 SLC2A2P11168 524 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 CCL2P13500 99 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 ZNF250P15622 560 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 GPR6P46095 362 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 PPP5CP53041 499 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 FAM3AP98173 230 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 PCGF3Q3KNV8 242 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 C1orf100Q5SVJ3 147 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 FTMTQ8N4E7 242 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 OR13C9Q8NGT0 318 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 OR2AE1Q8NHA4 323 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 CPNE2Q96FN4 548 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 DIRAS2Q96HU8 199 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 SOX7Q9BT81 388 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 REPIN1Q9BWE0 567 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 MIXL1Q9H2W2 232 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 METTL17Q9H7H0 456 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 LIN7BQ9HAP6 207 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 MYEF2Q9P2K5 600 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 RABL2AQ9UBK7 228 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 RABL2BQ9UNT1 228 aa14.36□□□□□ -0.11
SCAMP4-204ENST00000414057 IGLV3-9A0A075B6K5 115 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 PHF1O43189 567 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 APOA1P02647 267 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 HPXP02790 462 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 NAT2P11245 290 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 TALDO1P37837 337 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 GSK3AP49840 483 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 ZNF92Q03936 586 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 RAB11BQ15907 218 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 HES5Q5TA89 166 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 KRT74Q7RTS7 529 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 MRPL21Q7Z2W9 205 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 SAMD12Q8N8I0 201 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 CSNK2A3Q8NEV1 391 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 OR51A2Q8NGJ7 313 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 OR51B6Q9H340 312 aa14.35□□□□□ -0.11
SCAMP4-204ENST00000414057 ZNF816-ZNF321PA0A0X1KG74 233 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 LYNX1G3V0Z9 82 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 HPGDSO60760 199 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 OCMP0CE72 109 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 LYNX1P0DP58 116 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 FAHP16930 419 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 HTR2CP28335 458 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 GCH1P30793 250 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 WNT5AP41221 380 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 GK2Q14410 553 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 CNN3Q15417 329 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 CR1LQ2VPA4 569 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 UBE2NLQ5JXB2 153 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 CLVS2Q5SYC1 327 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 TMEM42Q69YG0 159 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 LYPD6Q86Y78 171 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 PAQR4Q8N4S7 273 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 DNAAF1Q8NEP3 725 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 OR1J1Q8NGS3 322 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 SPSB1Q96BD6 273 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 C1orf159Q96HA4 380 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 NKIRAS2Q9NYR9 191 aa14.34□□□□□ -0.11
SCAMP4-204ENST00000414057 B4DSR2 109 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 COL8A2P25067 703 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 ACKR3P25106 362 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 BAIAP2L2Q6UXY1 529 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 JAGN1Q8N5M9 183 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 LGALS14Q8TCE9 139 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 RAB40AQ8WXH6 277 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 CYSLTR2Q9NS75 346 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 STARD10Q9Y365 291 aa14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-204ENST00000414057 FABP12A6NFH5 140 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 PPIHO43447 177 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 PAHP00439 452 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 NGFP01138 241 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 SNRPBP14678 240 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 PRKACBP22694 351 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 ZNF93P35789 620 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 DVL1P1P54792 670 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 ALKBH6Q3KRA9 238 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 ZNF718Q3SXZ3 478 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 FBXW12Q6X9E4 464 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 ZNF101Q8IZC7 436 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 OR5AS1Q8N127 324 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 CCDC32Q9BV29 185 aa14.32□□□□□ -0.12
SCAMP4-204ENST00000414057 DECR2Q9NUI1 292 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms