RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RAB18Q9NP72 206 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 ZNF586Q9NXT0 402 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 MEMO1Q9Y316 297 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 C1QTNF9BB2RNN3 333 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 H0Y980 276 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 H3BQ15 152 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SMAD7O15105 426 aaKnown RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 CEACAM4O75871 244 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 GPANK1O95872 356 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 APBA3O96018 575 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 THY1P04216 161 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 MPC1LP0DKB6 136 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SMIM17P0DL12 118 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 EPCAMP16422 314 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 FUT3P21217 361 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 AK4P27144 223 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 DNASE1L1P49184 302 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 IL2P60568 153 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 B4GALNT1Q00973 533 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ZNF266Q14584 549 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ATXN7L3Q14CW9 347 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 RAB30Q15771 203 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 RAB41Q5JT25 222 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 RAET1LQ5VY80 246 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 CPEB2Q7Z5Q1 589 aaKnown RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 ABHD4Q8TB40 342 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 BLNKQ8WV28 456 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 PGLYRP3Q96LB9 341 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 GABRG3Q99928 467 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 LYRM4Q9HD34 91 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ERG28Q9UKR5 140 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 HHLA2Q9UM44 414 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ETV7Q9Y603 341 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 A0A1W2PR80 420 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 OR6C6A6NF89 314 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 KLF8O95600 359 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 IL2RAP01589 272 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 IFNW1P05000 195 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 FGF1P05230 155 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 H1F0P07305 194 aaKnown RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 OR1D2P34982 312 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 PAX9P55771 341 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 TAS2R19P59542 299 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 GNB2P62879 340 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ENPP7Q6UWV6 458 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 OR5AR1Q8NGP9 310 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SNIP1Q8TAD8 396 aaKnown RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 TSSK2Q96PF2 358 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SPATA25Q9BR10 227 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SLC17A9Q9BYT1 436 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 RTN4RQ9BZR6 473 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 RNF39Q9H2S5 420 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 PLA2G3Q9NZ20 509 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SCML2Q9UQR0 700 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 A0A087WX48 190 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 TRBV4-1A0A0J9YWV2 114 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ANTXRLA6NF34 631 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 B4DEV8 164 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 CR2P20023 1033 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 OTX2P32243 289 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 LIM2P55344 173 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 RUNX1Q01196 453 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ZNF154Q13106 437 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SLC25A35Q3KQZ1 300 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ZNF766Q5HY98 468 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 DMKNQ6E0U4 476 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 ZNF101Q8IZC7 436 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 ZNF296Q8WUU4 475 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 PPP1R1CQ8WVI7 109 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SUSD6Q92537 303 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 RAB8BQ92930 207 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 APOBEC3DQ96AK3 386 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 GPR82Q96P67 336 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 SLC25A21Q9BQT8 299 aaPredicted RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 STRADBQ9C0K7 418 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 POLR2J3Q9H1A7 115 aaKnown RBP4.6□□□□□ -1.67
HERC4-205ENST00000412272 TM7SF3Q9NS93 570 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 LRIT1Q9P2V4 623 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 CDC42EP3Q9UKI2 254 aa4.6□□□□□ -1.67
HERC4-205ENST00000412272 NINQ8N4C6 2090 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 J3KTA2 159 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 VENTXO95231 258 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 MDKP21741 143 aaPredicted RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 SLC6A6P31641 620 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 ACVR1BP36896 505 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 PRLHRP49683 370 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 CLDN15P56746 228 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 HSD52Q0P140 79 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 TAF13Q15543 124 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 TP53I3Q53FA7 332 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 TRMT12Q53H54 448 aaKnown RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 SLC8B1Q6J4K2 584 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 Q6ZN92 141 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 ZNF788Q6ZQV5 615 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 PARS2Q7L3T8 475 aaKnown RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 OLIG3Q7RTU3 272 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 CMTM4Q8IZR5 234 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 OR52E5Q8NH55 327 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 A4GALTQ9NPC4 353 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms