RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 NAT8BQ9UHF3 227 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 LOC102723971A0A1B0GUV8 181 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 ISLRO14498 428 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 CFDP00746 253 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-203ENST00000409050 CSF2RBP32927 897 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 ETFDHQ16134 617 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 LTC4SQ16873 150 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 FFAR4Q5NUL3 377 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 SLC25A42Q86VD7 318 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 OR8D4Q8NGM9 314 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 FOXN4Q96NZ1 517 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 ZMAT5Q9UDW3 170 aaKnown RBP5.46□□□□□ -1.54
SCN1A-203ENST00000409050 FBXO4Q9UKT5 387 aa5.46□□□□□ -1.54
SCN1A-203ENST00000409050 TNRC6CQ9HCJ0 1690 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 LINC01553A4QN01 128 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 RBFOX3A6NFN3 312 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 K7ERU9 68 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 HOXD4P09016 255 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 SCGB1C2P0DMR2 95 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 NME1P15531 152 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 BCL3P20749 454 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 DHRS11Q6UWP2 260 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 TOMM20LQ6UXN7 152 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 SHISA6Q6ZSJ9 500 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 ROBO4Q8WZ75 1007 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 GHITMQ9H3K2 345 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 BOLA1Q9Y3E2 137 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 ZNF737O75373 536 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 OR2J2O76002 312 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 HBZP02008 142 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 FAM3BP58499 235 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 PKIAP61925 76 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 KISS1Q15726 138 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MICBQ29980 383 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 XAF1Q6GPH4 301 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 DDX60Q8IY21 1712 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 LSMEM1Q8N8F7 131 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 UBAC2Q8NBM4 344 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 TMEM104Q8NE00 496 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 RDH5Q92781 318 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MOB3AQ96BX8 217 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 HSD17B10Q99714 261 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 FAM117AQ9C073 453 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 RBM38Q9H0Z9 239 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 ZNF230Q9UIE0 474 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 METTL12A8MUP2 240 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MS4A18H0YCH9 400 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 M0R1X1 148 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 SRP14P37108 136 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 INSM1Q01101 510 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 INPP5JQ15735 1006 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MS4A18Q3C1V0 323 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 FBXL14Q8N1E6 418 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 BVESQ8NE79 360 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 C17orf47Q8NEP4 570 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 PRSS3P2Q8NHM4 247 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 AKR7LQ8NHP1 331 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 CNRIP1Q96F85 164 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 OR2V2Q96R30 315 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MAP1LC3CQ9BXW4 147 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MAGT1Q9H0U3 335 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 TMEM9BQ9NQ34 198 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 SPTY2D1-AS1A0A0U1RR47 76 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 TMEM272A0A1B0GTI8 110 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 OOEPA6NGQ2 149 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 ZNF207O43670 478 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 CXCL13O43927 109 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 CEACAM5P06731 702 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 HIST1H1EP10412 219 aaKnown RBP5.45□□□□□ -1.54
SCN1A-203ENST00000409050 RAB9AP51151 201 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 RNF151Q2KHN1 245 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 LIMS2Q7Z4I7 341 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 OR10A7Q8NGE5 316 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 OR10G8Q8NGN5 311 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 LHFPL5Q8TAF8 219 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 MIOXQ9UGB7 285 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 ICAM5Q9UMF0 924 aa5.45□□□□□ -1.54
SCN1A-203ENST00000409050 HSPB6O14558 160 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 KCNAB3O43448 404 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 CDC14BO60729 498 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 ACTL6AO96019 429 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 NGFP01138 241 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 FAM87AP0C7U9 286 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 RPL7P18124 248 aaKnown RBP5.44□□□□□ -1.54
SCN1A-203ENST00000409050 PCMT1P22061 227 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 BRS3P32247 399 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 HTRA3P83110 453 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 NHLH1Q02575 133 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 NHLH2Q02577 135 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 GABRA6Q16445 453 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 IZUMO4Q1ZYL8 232 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 PTCRAQ6ISU1 281 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-203ENST00000409050 VHLLQ6RSH7 139 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 BCDIN3DQ7Z5W3 292 aaKnown RBP5.44□□□□□ -1.54
SCN1A-203ENST00000409050 OR10AD1Q8NGE0 317 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 C20orf24Q9BUV8 137 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 FAM234AQ9H0X4 552 aa5.44□□□□□ -1.54
SCN1A-203ENST00000409050 ESRP2Q9H6T0 727 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms