RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TRBV6-7A0A0A0MS04 114 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 EEF1E1-BLOC1S5C9J1V9 151 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 F5H0A9 414 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 MFNGO00587 321 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 CRTAPO75718 401 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 SERPINF1P36955 418 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 MAGEA5P43359 124 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 ZNF273Q14593 569 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 GTPBP8Q8N3Z3 284 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 PNLDC1Q8NA58 520 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 OR14K1Q8NGZ2 314 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 TAAR6Q96RI8 345 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 SOX7Q9BT81 388 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 MS4A7Q9GZW8 240 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 ZDHHC11Q9H8X9 412 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 ACKR4Q9NPB9 350 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 TAS2R3Q9NYW6 316 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 GPR132Q9UNW8 380 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 FAM166BA8MTA8 275 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 TRAPPC6AO75865 159 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 PRF1P14222 555 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 FPR2P25090 351 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 PMP22Q01453 160 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 ECH1Q13011 328 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 BEX5Q5H9J7 111 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 PCSK4Q6UW60 755 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 TMPPEQ6ZT21 453 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 OR5H2Q8NGV7 314 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 STOML3Q8TAV4 291 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 OR10A2Q9H208 303 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 PIGMQ9H3S5 423 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 BANF2Q9H503 90 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 C12orf4Q9NQ89 552 aa13.9□□□□□ -0.18
CHRFAM7A-203ENST00000401522 NCKAP5O14513 1909 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TEX13DA0A0J9YY54 714 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 RAMP1O60894 148 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 SFT2D2O95562 160 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 THBS4P35443 961 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 GUCA1AP43080 201 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 ALDH3B1P43353 468 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TMEM50BP56557 158 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 SLC10A1Q14973 349 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 UQCC3Q6UW78 93 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 FAM89BQ8N5H3 189 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 Q8NA96 180 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 OR14L1PQ8NHC6 308 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 PIGQQ9BRB3 760 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 RAB18Q9NP72 206 aa13.89□□□□□ -0.19
CHRFAM7A-203ENST00000401522 IGKV1-9A0A0C4DH69 117 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 C13orf42A0A1B0GVH6 325 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 F8VVB4 439 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 F8VWA3 439 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TRIM77I1YAP6 450 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 RAD51DO75771 328 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 IGLV3-1P01715 115 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 CELA3AP09093 270 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 AMY2BP19961 511 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 MSR1P21757 451 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 CSNK1A1P48729 337 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 CLDN17P56750 224 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 B3GALT5-AS1P59052 145 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TAS2R46P59540 309 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 ARFRP1Q13795 201 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 C10orf128Q5T292 105 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 PEG10Q86TG7 708 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 YRDCQ86U90 279 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 ARHGAP5-AS1Q96IT6 56 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 ZNF416Q9BWM5 594 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 C5orf66Q9H5L9 145 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 A0A0U1RQV5 110 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 APOC3P02656 99 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 NPY4RP50391 375 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 NAAAQ02083 359 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 SGCAQ16586 387 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 GFOD2Q3B7J2 385 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 WIPI1Q5MNZ9 446 aaPredicted RBP13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 NSUN5P2Q63ZY6 315 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 ELP2Q6IA86 826 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 FOXL2NBQ6ZUU3 175 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 CCDC54Q8NEL0 328 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 GJC3Q8NFK1 279 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 DCUN1D4Q92564 292 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TMEM54Q969K7 222 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TMEM230Q96A57 120 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 PIK3IP1Q96FE7 263 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 FLVCR1Q9Y5Y0 555 aa13.88□□□□□ -0.19
CHRFAM7A-203ENST00000401522 BSNQ9UPA5 3926 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 RAB19A4D1S5 217 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 LINC01387J3KSC0 135 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TPD52L2O43399 206 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 CRYABP02511 175 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 TPT1P13693 172 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 PTGFRP43088 359 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 ZNF133P52736 654 aaPredicted RBP13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 GFRA1P56159 465 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 H3F3AP84243 136 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 KLRB1Q12918 225 aa13.87□□□□□ -0.19
CHRFAM7A-203ENST00000401522 LY6DQ14210 128 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms