RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 CFHR2P36980 270 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 PDLIM4P50479 330 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 FABP5Q01469 135 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 OR8G1Q15617 311 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 ZNF181Q2M3W8 571 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 CHRFAM7AQ494W8 412 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 ACSM3Q53FZ2 586 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 SPRNQ5BIV9 151 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 WDR86Q86TI4 376 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 C11orf53Q8IXP5 236 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 ZDHHC23Q8IYP9 409 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 OR2Z1Q8NG97 314 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 OR10AD1Q8NGE0 317 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 Q8TCH9 128 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 ERGIC1Q969X5 290 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 SPSB1Q96BD6 273 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 MSI2Q96DH6 328 aaKnown RBP7.74□□□□□ -1.17
VPS53-203ENST00000401468 ELMOD3Q96FG2 381 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 OR2V2Q96R30 315 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 TMED9Q9BVK6 235 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 PAPOLGQ9BWT3 736 aaKnown RBP7.74□□□□□ -1.17
VPS53-203ENST00000401468 RAB1BQ9H0U4 201 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 PPIL3Q9H2H8 161 aaKnown RBP7.74□□□□□ -1.17
VPS53-203ENST00000401468 ZCCHC4Q9H5U6 513 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 PLEKHA1Q9HB21 404 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 LPAR2Q9HBW0 351 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
VPS53-203ENST00000401468 IGKV1-27A0A075B6S5 117 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 TRAV8-7A0A075B6U6 113 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 ANXA2P2A6NMY6 339 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 VWC2LB2RUY7 222 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 F5H5P2 479 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 GABRPO00591 440 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 SPRY3O43610 288 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 HPXP02790 462 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 ACAA1P09110 424 aaPredicted RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 DAOP14920 347 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 ZNF20P17024 532 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 ATF1P18846 271 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 TNFSF4P23510 183 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 MPZP25189 248 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 CFPP27918 469 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 THBS2P35442 1172 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 GNALP38405 381 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 NR4A2P43354 598 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 SRP9P49458 86 aaKnown RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 GNG3P63215 75 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 CCL8P80075 99 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 TNFAIP6P98066 277 aaPredicted RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 MZT1Q08AG7 82 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 ZNF154Q13106 437 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 INSL4Q14641 139 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 GDPGP1Q6ZNW5 385 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 CDH26Q8IXH8 852 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 TSEN15Q8WW01 171 aaKnown RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 PIGCQ92535 297 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 DVL3Q92997 716 aaPredicted RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 BEX2Q9BXY8 128 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 OR51I2Q9H344 312 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 GCM1Q9NP62 436 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 MYOZ1Q9NP98 299 aaPredicted RBP7.73□□□□□ -1.17
VPS53-203ENST00000401468 NOX4Q9NPH5 578 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 C14orf119Q9NWQ9 140 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 TREM2Q9NZC2 230 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 STUB1Q9UNE7 303 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 DSCAML1Q8TD84 2053 aa7.73□□□□□ -1.17
VPS53-203ENST00000401468 TRAV1-2A0A0B4J238 106 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 A6NIN4 97 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 H3BSH0 61 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 IFNL4K9M1U5 179 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 NOS1APO75052 506 aaPredicted RBP7.72□□□□□ -1.17
VPS53-203ENST00000401468 ARL6IP5O75915 188 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TGFAP01135 160 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 LHBP01229 141 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 ERCC1P07992 297 aaPredicted RBP7.72□□□□□ -1.17
VPS53-203ENST00000401468 SLC25A16P16260 332 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 CD36P16671 472 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 ADRA2CP18825 462 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TNFRSF1AP19438 455 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 SRMP19623 302 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 RAB6AP20340 208 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 PRKACBP22694 351 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 COL8A2P25067 703 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 GIFP27352 417 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 RPL5P46777 297 aaKnown RBP7.72□□□□□ -1.17
VPS53-203ENST00000401468 SOX2P48431 317 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 FUT6P51993 359 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
VPS53-203ENST00000401468 CNN3Q15417 329 aaKnown RBP7.72□□□□□ -1.17
VPS53-203ENST00000401468 CEP78Q5JTW2 689 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 FAM27D1Q5T7N8 215 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 PLCXD3Q63HM9 321 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 CYB5R2Q6BCY4 276 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 SLC16A12Q6ZSM3 486 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 LHFPL2Q6ZUX7 228 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 CEACAM19Q7Z692 300 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 LRRTM1Q86UE6 522 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms