RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 THBS3P49746 956 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 PPP1R1AQ13522 171 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TESK1Q15569 626 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TOR2AQ5JU69 321 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 Q6ZRG5 221 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 RNF150Q9ULK6 438 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TRGV8A0A0C4DH27 118 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 A0A1W2PR77 199 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 TMEM30CPA0ZSE6 113 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR5B21A6NL26 309 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 HLA-DOBP13765 273 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 MLF1P58340 268 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 DBPQ10586 325 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 FHL5Q5TD97 284 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 CIB3Q96Q77 187 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ACTL6AO96019 429 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 RPS4Y1P22090 263 aaKnown RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF79Q15937 498 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 PLPPR5Q32ZL2 321 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 NXF2Q9GZY0 626 aaKnown RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 AK3Q9UIJ7 227 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 PLA2G10O15496 165 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 EFEMP2O95967 443 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 CA6P23280 308 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZXDAP98168 799 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 GFRALQ6UXV0 394 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 LRRTM1Q86UE6 522 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 C20orf196Q8IYI0 205 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF485Q8NCK3 441 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR5AP2Q8NGF4 316 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR13G1Q8NGZ3 307 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 RAB18Q9NP72 206 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 KCNE5Q9UJ90 142 aa12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 PURGQ9UJV8 347 aaKnown RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 SIRT4Q9Y6E7 314 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZFP92A6NM28 416 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 ICMTO60725 284 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 CD80P33681 288 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 PDCD1Q15116 288 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 PIK3IP1Q96FE7 263 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 UCN2Q96RP3 112 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 ADAM19Q9H013 955 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 SHARPINQ9H0F6 387 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 MPC1Q9Y5U8 109 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 A0A0G2JMZ2 1700 aa12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 PDCD11Q14690 1871 aaKnown RBP12.58□□□□□ -0.39
PCDHGA11-201ENST00000398587 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZNF17P17021 662 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 FOXL2P58012 376 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 FOXC1Q12948 553 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 BTF3L4Q96K17 158 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 TCEAL7Q9BRU2 100 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 GLRX2Q9NS18 164 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 NME2P1O60361 137 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 SFT2D2O95562 160 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 ANKRD34CP0C6C1 535 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 TRMT61AQ96FX7 289 aaKnown RBP12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 SUB1P53999 127 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 POC1BQ8TC44 478 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 HGDQ93099 445 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 DAZAP1Q96EP5 407 aaKnown RBP12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZNF75AQ96N20 296 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 TGIF2Q9GZN2 237 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 CACFD1Q9UGQ2 172 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 TMED3Q9Y3Q3 217 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 RLFQ13129 1914 aa12.58□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 DCAF10Q5QP82 559 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 OR8U1Q8NH10 309 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 VWCEQ96DN2 955 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 RAB27BO00194 218 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 FGF5P12034 268 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 RAB5CP51148 216 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 IGLV3-21P80748 117 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 SP6Q3SY56 376 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 ST6GAL2Q96JF0 529 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 PRRX2Q99811 253 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 C9orf170A2RU37 121 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 TNFRSF1AP19438 455 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 CSF2RBP32927 897 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 CLLU1Q5K131 121 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 GVQW1Q8N7I0 195 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 ST7LQ8TDW4 575 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 CLDN23Q96B33 292 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 KCNK15Q9H427 330 aa12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 ZNF107Q9UII5 783 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA11-201ENST00000398587 F6UZH7 168 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms