RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 KCNK17Q96T54 332 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 NUDT22Q9BRQ3 303 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 OR10A2Q9H208 303 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 TUBA4BQ9H853 241 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 A0A1W2PQD3 144 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 C2orf72A6NCS6 295 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF587BE7ETH6 402 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-206ENST00000397163 TSPAN2O60636 221 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 PTGER4P35408 488 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 BIDP55957 195 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 DCAF7P61962 342 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 NUTF2P61970 127 aaKnown RBP8.08□□□□□ -1.12
CAPN3-206ENST00000397163 H1FNTQ75WM6 255 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-206ENST00000397163 C9orf40Q8IXQ3 194 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 OR5AS1Q8N127 324 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF610Q8N9Z0 462 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 PNLDC1Q8NA58 520 aaKnown RBP8.08□□□□□ -1.12
CAPN3-206ENST00000397163 Q8WTZ3 238 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 RARRES2Q99969 163 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 GPR84Q9NQS5 396 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 SIRT7Q9NRC8 400 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF701Q9NV72 531 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-206ENST00000397163 STARD10Q9Y365 291 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 HDGFL3Q9Y3E1 203 aa8.08□□□□□ -1.12
CAPN3-206ENST00000397163 A6NNC1 897 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 FTCDNL1E5RQL4 147 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 SNCAP37840 140 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 FAM3AP98173 230 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 FAM189A2Q15884 450 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 OR2T2Q6IF00 324 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 HIST3H2BBQ8N257 126 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 C17orf78Q8N4C9 275 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 OR10S1Q8NGN2 331 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 NPRL2Q8WTW4 380 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 PACRGQ96M98 296 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-206ENST00000397163 C1orf147Q96MC9 270 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-206ENST00000397163 KCNJ16Q9NPI9 418 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 OR5H15A6NDH6 313 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 OR5H1A6NKK0 313 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 DEDDO75618 318 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 SERPINA2P20848 420 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 BLVRBP30043 206 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-206ENST00000397163 TNFRSF9Q07011 255 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 TCEAL6Q6IPX3 200 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 SGPP2Q8IWX5 399 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 OR1J1Q8NGS3 322 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 OR2AJ1Q8NGZ0 328 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 TMEM234Q8WY98 164 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 ERGIC1Q969X5 290 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 SNX22Q96L94 193 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 WWTR1Q9GZV5 400 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 ELL3Q9HB65 397 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-206ENST00000397163 LUZP4Q9P127 313 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 COPS7AQ9UBW8 275 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 MMACHCQ9Y4U1 282 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 TMEM265A0A087WTH1 108 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 IL2RGP31785 369 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 GFERP55789 205 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 ERVFRD-1P60508 538 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 NSDHLQ15738 373 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 MFSD8Q8NHS3 518 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 MRPL24Q96A35 216 aaKnown RBP8.07□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 VDAC3Q9Y277 283 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 HS3ST3A1Q9Y663 406 aa8.07□□□□□ -1.12
CAPN3-206ENST00000397163 BORCS7-ASMTA0A0B4J1R7 106 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 SEC14L6B5MCN3 397 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 H3BML4 177 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 GEMIN2O14893 280 aaKnown RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 SEMA4FO95754 770 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 THEGLP0DJG4 465 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 PMELP40967 661 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 ASCL1P50553 236 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF121P58317 390 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 ACY1Q03154 408 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 GGNBP1Q5YKI7 109 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 RPUSD3Q6P087 351 aaKnown RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 COMMD1Q8N668 190 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 KDF1Q8NAX2 398 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 OR8B12Q8NGG6 310 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 LYPD6BQ8NI32 183 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 DAZLQ92904 295 aaKnown RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 SH3BGRL3Q9H299 93 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 TP53TG5Q9Y2B4 290 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 IGHV5-51A0A0C4DH38 117 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 MMP7P09237 267 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 THBS4P35443 961 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 PPP1CCP36873 323 aaKnown RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 HSD11B2P80365 405 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF2Q9BSG1 426 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 DUSP15Q9H1R2 295 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-206ENST00000397163 NELFAQ9H3P2 528 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 BCO1Q9HAY6 547 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 CHST11Q9NPF2 352 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms