RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CHRFAM7AQ494W8 412 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 HES3Q5TGS1 186 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 RPUSD3Q6P087 351 aaKnown RBP14.57□□□□□ -0.08
NUP50-202ENST00000396096 DHRS13Q6UX07 377 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 ACOT7LQ6ZUV0 252 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 MDS2Q8NDY4 140 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 CPEB3Q8NE35 698 aaKnown RBP14.57□□□□□ -0.08
NUP50-202ENST00000396096 MRPS24Q96EL2 167 aaKnown RBP14.57□□□□□ -0.08
NUP50-202ENST00000396096 FER1L6-AS2Q96M78 137 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 REG4Q9BYZ8 158 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 SLC6A15Q9H2J7 730 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 RAB18Q9NP72 206 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 PLA2G3Q9NZ20 509 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 IL17BQ9UHF5 180 aa14.57□□□□□ -0.08
NUP50-202ENST00000396096 CFAP54Q96N23 3096 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 FAM166BA8MTA8 275 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 I3L521 148 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 BCL2L11O43521 198 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 SPRY1O43609 319 aaPredicted RBP14.56□□□□□ -0.08
NUP50-202ENST00000396096 ANGPTL7O43827 346 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 NME2P1O60361 137 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 TNFSF15O95150 251 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 CRHP06850 196 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 COX5BP10606 129 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 NME2P22392 152 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 SERPINF1P36955 418 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 SRYQ05066 204 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 CLEC18BQ6UXF7 455 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 ZSCAN4Q8NAM6 433 aaPredicted RBP14.56□□□□□ -0.08
NUP50-202ENST00000396096 POM121Q96HA1 1249 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 TMEM9BQ9NQ34 198 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 SLC7A11Q9UPY5 501 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 KLF13Q9Y2Y9 288 aaPredicted RBP14.56□□□□□ -0.08
NUP50-202ENST00000396096 R4GN57 208 aa14.56□□□□□ -0.08
NUP50-202ENST00000396096 GPR179Q6PRD1 2367 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 TRBV6-7A0A0A0MS04 114 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 FAM25EA8MYX2 175 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 SDCBPO00560 298 aaPredicted RBP14.55□□□□□ -0.08
NUP50-202ENST00000396096 SP1P08047 785 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 RPS2P15880 293 aaKnown RBP14.55□□□□□ -0.08
NUP50-202ENST00000396096 DTYMKP23919 212 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 CHATP28329 748 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 LINC00696Q6ZRV3 163 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 TUSC5Q8IXB3 177 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 COQ8AQ8NI60 647 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 THAP6Q8TBB0 222 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 MAFIPQ8WZ33 124 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 ST8SIA2Q92186 375 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 RBPMSQ93062 196 aaKnown RBP14.55□□□□□ -0.08
NUP50-202ENST00000396096 DECR2Q9NUI1 292 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 RDH8Q9NYR8 311 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 AHCTF1Q8WYP5 2266 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 IGKV1D-8A0A087WSZ0 117 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 IGKV1-12A0A0C4DH73 117 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 KANTRA0A1W2PQU2 76 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 MFSD2BA6NFX1 497 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 ZNF587BE7ETH6 402 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 MSTNO14793 375 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 IGKV1D-12P01611 117 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 IGHV3-9P01782 118 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 PSMB6P28072 239 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 PLGLB1Q02325 96 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 PDZK1IP1Q13113 114 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 NKAPLQ5M9Q1 402 aa14.55□□□□□ -0.08
NUP50-202ENST00000396096 VRK1Q99986 396 aaPredicted RBP14.55□□□□□ -0.08
NUP50-202ENST00000396096 ZNF701Q9NV72 531 aaPredicted RBP14.55□□□□□ -0.08
NUP50-202ENST00000396096 C5orf51A6NDU8 294 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 EEF1E1-BLOC1S5C9J1V9 151 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 SPDEFO95238 335 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 TAF9Q16594 264 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 LRRC37A5PQ49AS3 106 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 MOB3CQ70IA8 216 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 OSR2Q8N2R0 312 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 SLC25A32Q9H2D1 315 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 CHMP1AQ9HD42 196 aaPredicted RBP14.54□□□□□ -0.08
NUP50-202ENST00000396096 PCDHB16Q9NRJ7 776 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 AK3Q9UIJ7 227 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 ANXA10Q9UJ72 324 aa14.54□□□□□ -0.08
NUP50-202ENST00000396096 KLRC4-KLRK1H3BQV0 150 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 ACTL6AO96019 429 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 RLN2P04090 185 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 ZNF250P15622 560 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 MEOX1P50221 254 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 PRSS12P56730 875 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 RNPS1Q15287 305 aaKnown RBP14.53□□□□□ -0.08
NUP50-202ENST00000396096 ANKRD55Q3KP44 614 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 PLCXD3Q63HM9 321 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 FNDC9Q8TBE3 224 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 CXorf58Q96LI9 332 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 DHRS9Q9BPW9 319 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 FAAP24Q9BTP7 215 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 WDR13Q9H1Z4 485 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 CALHM2Q9HA72 323 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 ACKR4Q9NPB9 350 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 SDHAF2Q9NX18 166 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 MBD2Q9UBB5 411 aa14.53□□□□□ -0.08
NUP50-202ENST00000396096 GLRA1P23415 457 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 PMELP40967 661 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 BAMBIQ13145 260 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 SLC9A3R2Q15599 337 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms