RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 LOC110117498-PIK3R3F6TDL0 507 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 NRASP01111 189 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 CEBPDP49716 269 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-206ENST00000395795 RASSF2P50749 326 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 PROK1P58294 105 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 RPL15P61313 204 aaKnown RBP13.21□□□□□ -0.29
CXCL12-206ENST00000395795 OLFML2AQ68BL7 652 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 CATSPERDQ86XM0 798 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 CALHM1Q8IU99 346 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 ZDHHC13Q8IUH4 622 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 OR51G2Q8NGK0 314 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 H1FXQ92522 213 aaKnown RBP13.21□□□□□ -0.29
CXCL12-206ENST00000395795 HIST1H2AAQ96QV6 131 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 MOB1AQ9H8S9 216 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 OAZ3Q9UMX2 235 aa13.21□□□□□ -0.29
CXCL12-206ENST00000395795 IGKV1-27A0A075B6S5 117 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 A0A1B0GUS0 222 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 RFPL4AA6NLU0 287 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 ZNF670-ZNF695F2Z2N8 137 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 RFPL4AL1F8VTS6 287 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 J3QT63 122 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 DLGAP1O14490 977 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 APOL3O95236 402 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 HTR1FP30939 366 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 SAA4P35542 130 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 GABRA2P47869 451 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 UBE2E1P51965 193 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 CLVS2Q5SYC1 327 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 Q6ZSV7 163 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 CCDC121Q6ZUS5 278 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 COMMD2Q86X83 199 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 GID4Q8IVV7 300 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 ZSCAN4Q8NAM6 433 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-206ENST00000395795 ZNF671Q8TAW3 534 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 NPRL2Q8WTW4 380 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 RORBQ92753 470 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 EME1Q96AY2 570 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 PRRG3Q9BZD7 231 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 METTL8Q9H825 291 aaKnown RBP13.2□□□□□ -0.3
CXCL12-206ENST00000395795 BEX1Q9HBH7 125 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 RASL12Q9NYN1 266 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
CXCL12-206ENST00000395795 SNX5Q9Y5X3 404 aa13.2□□□□□ -0.3
CXCL12-206ENST00000395795 DHRS7CA6NNS2 312 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 F8VVB4 439 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 F8VWA3 439 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 CLPXO76031 633 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 KNG1P01042 644 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 NDUFB7P17568 137 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 HAAOP46952 286 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 ZNF85Q03923 595 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 BCL2L15Q5TBC7 163 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 C1orf146Q5VVC0 180 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 TREML4Q6UXN2 200 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 ASRGL1Q7L266 308 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 CMTM4Q8IZR5 234 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 PRSS35Q8N3Z0 413 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 TMEM185AQ8NFB2 350 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 CENPNQ96H22 339 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-206ENST00000395795 TBX5Q99593 518 aa13.19□□□□□ -0.3
CXCL12-206ENST00000395795 TRBV23-1A0A0A0MS06 115 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 H3BNX3 289 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 J3QRE1 110 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 FBP1P09467 338 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 KIR3DL2P43630 455 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 DLX6P56179 175 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 BATF2Q8N1L9 274 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 C16orf95Q9H693 158 aa13.18□□□□□ -0.3
CXCL12-206ENST00000395795 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-206ENST00000395795 SAC3D1A6NKF1 404 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 TSPAN9O75954 239 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 RPP14O95059 124 aaKnown RBP13.17□□□□□ -0.3
CXCL12-206ENST00000395795 CRYBA1P05813 215 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 PAX6P26367 422 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 PRDX2P32119 198 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 ZNF273Q14593 569 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 OCLNQ16625 522 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 ZNF573Q86YE8 665 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 MKXQ8IYA7 352 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 OR8J1Q8NGP2 316 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 DPAGT1Q9H3H5 408 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 MTCH1Q9NZJ7 389 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 VPREB3Q9UKI3 123 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 GTF2A1LQ9UNN4 478 aa13.17□□□□□ -0.3
CXCL12-206ENST00000395795 A0A1W2PQ09 198 aa13.16□□□□□ -0.3
CXCL12-206ENST00000395795 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms