RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 RDH10Q8IZV5 341 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 KIR3DL3Q8N743 410 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 POC1AQ8NBT0 407 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 FAM81AQ8TBF8 368 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 GATAD2BQ8WXI9 593 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 ZDHHC16Q969W1 377 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 CENPNQ96H22 339 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-205ENST00000394892 NRIP2Q9BQI9 281 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 DNTTIP1Q9H147 329 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 RIBC2Q9H4K1 309 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 BEX1Q9HBH7 125 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 HES4Q9HCC6 221 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 C19orf12Q9NSK7 152 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 ONECUT1Q9UBC0 465 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 SLC25A10Q9UBX3 287 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-205ENST00000394892 MMP24Q9Y5R2 645 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 TMEM14AQ9Y6G1 99 aa7.24□□□□□ -1.25
ATG4A-205ENST00000394892 VWFP04275 2813 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 OR5B21A6NL26 309 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 RFPL4AA6NLU0 287 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ZNF670-ZNF695F2Z2N8 137 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 RFPL4AL1F8VTS6 287 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 TIMM23O14925 209 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 GPR137BO60478 399 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 NOS1APO75052 506 aaPredicted RBP7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ENTPD6O75354 484 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 RPP14O95059 124 aaKnown RBP7.23□□□□□ -1.25
ATG4A-205ENST00000394892 NDUFA7O95182 113 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ALPLP05186 524 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 MPZP25189 248 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 DLX6P56179 175 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ACTR3P61158 418 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 EGR3Q06889 387 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 KPNB1Q14974 876 aaKnown RBP7.23□□□□□ -1.25
ATG4A-205ENST00000394892 SNCBQ16143 134 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ODF4Q2M2E3 257 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 LRRC10Q5BKY1 277 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 CLVS2Q5SYC1 327 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 LDLRAD2Q5SZI1 272 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 BCL2L15Q5TBC7 163 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 CRIP3Q6Q6R5 217 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 FTMTQ8N4E7 242 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 TMEM86BQ8N661 226 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 OR4F5Q8NH21 305 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 WFDC12Q8WWY7 111 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 H1FXQ92522 213 aaKnown RBP7.23□□□□□ -1.25
ATG4A-205ENST00000394892 DMRTB1Q96MA1 342 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 MBOAT4Q96T53 435 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ZNF649Q9BS31 505 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 TEX12Q9BXU0 123 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ABCB9Q9NP78 766 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 WARS2Q9UGM6 360 aaKnown RBP7.23□□□□□ -1.25
ATG4A-205ENST00000394892 ENPP5Q9UJA9 477 aa7.23□□□□□ -1.25
ATG4A-205ENST00000394892 IGKV1-9A0A0C4DH69 117 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 A0A1B0GVI7 797 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 METTL15A6NJ78 407 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 J3QT63 122 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 DLGAP1O14490 977 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 EI24O14681 340 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 NPFFO15130 113 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 GPR37O15354 613 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 ATP5HO75947 161 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 NDUFB7P17568 137 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 GABRB1P18505 474 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 PRDX2P32119 198 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 HAAOP46952 286 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 GABRA2P47869 451 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 RAG2P55895 527 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 NANOS3P60323 173 aaKnown RBP7.22□□□□□ -1.25
ATG4A-205ENST00000394892 ZNF273Q14593 569 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 TP53I3Q53FA7 332 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 TMEM200BQ69YZ2 307 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 C1orf122Q6ZSJ8 110 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 Q6ZSV7 163 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 TCF23Q7RTU1 214 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 THAP5Q7Z6K1 395 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 COMMD2Q86X83 199 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 GID4Q8IVV7 300 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 MKXQ8IYA7 352 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 YIPF7Q8N8F6 280 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 OR8J1Q8NGP2 316 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 OR10AC1Q8NH08 325 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 LINC01006Q8NI28 216 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 NPRL2Q8WTW4 380 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 SSMEM1Q8WWF3 244 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 ITFG2Q969R8 447 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 ADAT3Q96EY9 351 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-205ENST00000394892 MED30Q96HR3 178 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 HIST1H2AAQ96QV6 131 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 MNTQ99583 582 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 SLC29A1Q99808 456 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 MMP27Q9H306 513 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 USE1Q9NZ43 259 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 MTCH1Q9NZJ7 389 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 H2AFY2Q9P0M6 372 aaPredicted RBP7.22□□□□□ -1.25
ATG4A-205ENST00000394892 ZNRD1Q9P1U0 126 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 IL36RNQ9UBH0 155 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 GTF2A1LQ9UNN4 478 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 SNX5Q9Y5X3 404 aa7.22□□□□□ -1.25
ATG4A-205ENST00000394892 POMT1Q9Y6A1 747 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms