RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 OR7C1O76099 320 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-203ENST00000394269 EDN3P14138 238 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 MRPL21Q7Z2W9 205 aaKnown RBP9.66□□□□□ -0.86
TCOF1-203ENST00000394269 FAM109AQ8N4B1 249 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 TRIB1Q96RU8 372 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 MRPS18CQ9Y3D5 142 aaKnown RBP9.66□□□□□ -0.86
TCOF1-203ENST00000394269 TEX46H3BTG2 121 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 LINC01387J3KSC0 135 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 PRF1P14222 555 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 NFYAP23511 347 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-203ENST00000394269 CPT2P23786 658 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF133P52736 654 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-203ENST00000394269 CLN3Q13286 438 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 CLVS2Q5SYC1 327 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 MDS2Q8NDY4 140 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 PRSS33Q8NF86 280 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 IRF2BPLQ9H1B7 796 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 STARD10Q9Y365 291 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 CADP27708 2225 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 OR14I1A6ND48 311 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 LYZL6O75951 148 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 TPPPO94811 219 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 SFTPBP07988 381 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 CD37P11049 281 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 GPM6AP51674 278 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 ARPC4P59998 168 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 MED30Q96HR3 178 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 PECRQ9BY49 303 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 POM121CA8CG34 1229 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 CFDP00746 253 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 MMP7P09237 267 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 UBBP0CG47 229 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 CPN1P15169 458 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 TNFSF10P50591 281 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 RAP2BP61225 183 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 SSBP1Q04837 148 aaKnown RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 TCF15Q12870 199 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 GK2Q14410 553 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 CNN3Q15417 329 aaKnown RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 OR2W3Q7Z3T1 314 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 PIP4P1Q86T03 277 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 LIX1LQ8IVB5 337 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 FOXRED2Q8IWF2 684 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF680Q8NEM1 530 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 TOMM40LQ969M1 308 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 ACKR4Q9NPB9 350 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 B3GNT2Q9NY97 397 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 ST3GAL6Q9Y274 331 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 ARPC4-TTLL3A0A0A6YYG9 625 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 SCGNO76038 276 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 GLRA1P23415 457 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 HAAOP46952 286 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 NPBWR2P48146 333 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 PER3P56645 1201 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 TMEM17Q86X19 198 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 CALHM1Q8IU99 346 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 ZFP62Q8NB50 900 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 NEK7Q8TDX7 302 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF442Q9H7R0 627 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 OPN4Q9UHM6 478 aa9.65□□□□□ -0.86
TCOF1-203ENST00000394269 TMA7Q9Y2S6 64 aaKnown RBP9.65□□□□□ -0.86
TCOF1-203ENST00000394269 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 CD74P04233 296 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 GSTP1P09211 210 aaKnown RBP9.65□□□□□ -0.87
TCOF1-203ENST00000394269 GIPP09681 153 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-203ENST00000394269 CXCL2P19875 107 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 ATP1B3P54709 279 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 FXYD4P59646 89 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 CRIP3Q6Q6R5 217 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 TEX261Q6UWH6 196 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 C3P1Q6ZMU1 363 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 TERB2Q8NHR7 220 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 CRIM1Q9NZV1 1036 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 U3KQ87 197 aa9.65□□□□□ -0.87
TCOF1-203ENST00000394269 G3V3Q6 166 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 MPC2O95563 127 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 MELTFP08582 738 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 MALLQ13021 153 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 OPCMLQ14982 345 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 FAM209AQ5JX71 171 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 SPICQ8N5J4 248 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 IGKV1-12A0A0C4DH73 117 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 MFNGO00587 321 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 IGKV1D-12P01611 117 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 NAT2P11245 290 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 PRKACBP22694 351 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 IDH3GP51553 393 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-203ENST00000394269 STK11Q15831 433 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 ZNF611Q8N823 705 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 WDYHV1Q96HA8 205 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 CMSS1Q9BQ75 279 aaKnown RBP9.64□□□□□ -0.87
TCOF1-203ENST00000394269 COMMD9Q9P000 198 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 GSKIPQ9P0R6 139 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 KCNN3Q9UGI6 736 aa9.64□□□□□ -0.87
TCOF1-203ENST00000394269 ZNF816-ZNF321PA0A0X1KG74 233 aa9.63□□□□□ -0.87
TCOF1-203ENST00000394269 IGLV3-1P01715 115 aa9.63□□□□□ -0.87
TCOF1-203ENST00000394269 PPP3CBP16298 524 aa9.63□□□□□ -0.87
TCOF1-203ENST00000394269 APLNRP35414 380 aa9.63□□□□□ -0.87
TCOF1-203ENST00000394269 RNPS1Q15287 305 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms