RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 GAPDHP04406 335 aaKnown RBP16.45■□□□□ 0.22
CBX1-202ENST00000393408 CD5P06127 495 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 FCGR3AP08637 254 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 FCGR2CP31995 323 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 GGNBP1Q5YKI7 109 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 MRPL24Q96A35 216 aaKnown RBP16.45■□□□□ 0.22
CBX1-202ENST00000393408 SGK3Q96BR1 496 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 PLEK2Q9NYT0 353 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 FOXD3Q9UJU5 478 aaPredicted RBP16.45■□□□□ 0.22
CBX1-202ENST00000393408 CYC1P08574 325 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 SFTA3P0C7M3 94 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 TMEM225BP0DP42 221 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 NFYBP25208 207 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 HOXA1P49639 335 aaPredicted RBP16.44■□□□□ 0.22
CBX1-202ENST00000393408 RAB13P51153 203 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 ZNF528Q3MIS6 628 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 SPTSSAQ969W0 71 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 FBXO17Q96EF6 278 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 PRRX2Q99811 253 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 LIME1Q9H400 295 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 PARP11Q9NR21 331 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 PADI1Q9ULC6 663 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 EDARQ9UNE0 448 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 AMDHD2Q9Y303 409 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 KIAA1549Q9HCM3 1950 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 SUCLG1P53597 346 aaKnown RBP16.44■□□□□ 0.22
CBX1-202ENST00000393408 PLXDC2Q6UX71 529 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 GNRHR2Q96P88 292 aa16.44■□□□□ 0.22
CBX1-202ENST00000393408 FBXO24O75426 580 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 JTBO76095 146 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 IFNA21P01568 189 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 OR5H8P0DN80 308 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 ACKR3P25106 362 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 EPHA8P29322 1005 aaPredicted RBP16.43■□□□□ 0.22
CBX1-202ENST00000393408 MTCP1P56278 107 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 SMCO1Q147U7 214 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 RAET1LQ5VY80 246 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 ZIC4Q8N9L1 334 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 NAA11Q9BSU3 229 aaPredicted RBP16.43■□□□□ 0.22
CBX1-202ENST00000393408 FAAP24Q9BTP7 215 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 DUSP23Q9BVJ7 150 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 ANGPTL4Q9BY76 406 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 METTL9Q9H1A3 318 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 PROK2Q9HC23 129 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 CACNA1EQ15878 2313 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 LOC102723996A0A087X1L8 192 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 ZIC3O60481 467 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 CCL3P10147 92 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 LIFP15018 202 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 TMEM33P57088 247 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 STARD6P59095 220 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 SHEQ5VZ18 495 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 OPN5Q6U736 354 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 MAML2Q8IZL2 1156 aaPredicted RBP16.43■□□□□ 0.22
CBX1-202ENST00000393408 ZNF837Q96EG3 531 aaPredicted RBP16.43■□□□□ 0.22
CBX1-202ENST00000393408 ULBP2Q9BZM5 246 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 OCIAD1Q9NX40 245 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 AK3Q9UIJ7 227 aa16.43■□□□□ 0.22
CBX1-202ENST00000393408 FAM157AC9JC47 383 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 C9JQL5 133 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 ANGPTL7O43827 346 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 CRYGSP22914 178 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 F2RL1P55085 397 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 PDZK1IP1Q13113 114 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 FAM27BQ5VT28 67 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 SPSB1Q96BD6 273 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 ZNF581Q9P0T4 197 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 HSF4Q9ULV5 492 aa16.42■□□□□ 0.22
CBX1-202ENST00000393408 LSM5Q9Y4Y9 91 aaKnown RBP16.42■□□□□ 0.22
CBX1-202ENST00000393408 DSCR4P56555 118 aaPredicted RBP16.41■□□□□ 0.22
CBX1-202ENST00000393408 MRPS34P82930 218 aaKnown RBP16.41■□□□□ 0.22
CBX1-202ENST00000393408 TAF9Q16594 264 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 Q6ZRG5 221 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 C20orf196Q8IYI0 205 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 OR2AE1Q8NHA4 323 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 INTS12Q96CB8 462 aaKnown RBP16.41■□□□□ 0.22
CBX1-202ENST00000393408 WDR54Q9H977 334 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 POMT1Q9Y6A1 747 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 IGKV1-27A0A075B6S5 117 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 MEX3AA1L020 520 aaKnown RBP16.41■□□□□ 0.22
CBX1-202ENST00000393408 AGPAT2O15120 278 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 SPRY1O43609 319 aaPredicted RBP16.41■□□□□ 0.22
CBX1-202ENST00000393408 CD80P33681 288 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 ID4P47928 161 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 RRADP55042 308 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 PIGPP57054 158 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 FAM3AP98173 230 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 RSU1Q15404 277 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 DHRS11Q6UWP2 260 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 LYPD6BQ8NI32 183 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 RXFP4Q8TDU9 374 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 GLYATL2Q8WU03 294 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 SMIM3Q9BZL3 60 aa16.41■□□□□ 0.22
CBX1-202ENST00000393408 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 PCP4L1A6NKN8 68 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 CRYBA1P05813 215 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 DTYMKP23919 212 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 RPL35P42766 123 aaKnown RBP16.4■□□□□ 0.22
CBX1-202ENST00000393408 CHAF1BQ13112 559 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 UBAC2Q8NBM4 344 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms