RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 PARP16Q8N5Y8 322 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 OR4M2Q8NGB6 313 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 OR5D14Q8NGL3 314 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 PKIBQ9C010 78 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 ZCCHC4Q9H5U6 513 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 OR5V1Q9UGF6 321 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 CDC42EP3Q9UKI2 254 aa12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 SIRT4Q9Y6E7 314 aaPredicted RBP12.56□□□□□ -0.4
IGHV3-53-201ENST00000390627 PPIAL4CA0A0B4J2A2 164 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 IGKV1-9A0A0C4DH69 117 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 DENRO43583 198 aaKnown RBP12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 MT-ND2P03891 347 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 NPY4RP50391 375 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 SEC61A1P61619 476 aaKnown RBP12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 IL24Q13007 206 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 CR1LQ2VPA4 569 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 SLC36A1Q7Z2H8 476 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 ZFP41Q8N8Y5 198 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 OR13C9Q8NGT0 318 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 RGP1Q92546 391 aaPredicted RBP12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 GHSRQ92847 366 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 TMIGD2Q96BF3 282 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 PGLYRP3Q96LB9 341 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 OPALINQ96PE5 141 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 CCDC90BQ9GZT6 254 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 SHARPINQ9H0F6 387 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 RASL12Q9NYN1 266 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 NLKQ9UBE8 527 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 KAAG1Q9UBP8 84 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 CLN8Q9UBY8 286 aa12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 POLR3KQ9Y2Y1 108 aaPredicted RBP12.55□□□□□ -0.4
IGHV3-53-201ENST00000390627 PNMA8CA0A1B0GUJ8 204 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 NKX6-3A6NJ46 265 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 TNFRSF13BO14836 293 aaPredicted RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 TMPRSS2O15393 492 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 PHF1O43189 567 aaPredicted RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 SULT1B1O43704 296 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 SYNGR1O43759 233 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 NOS1APO75052 506 aaPredicted RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 CRLF1O75462 422 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 ALX3O95076 343 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 CD1AP06126 327 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 ZFP36P26651 326 aaKnown RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 SOX2P48431 317 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 MTCP1P56278 107 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 ACSM1Q08AH1 577 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 IRF3Q14653 427 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 SPHARQ15513 63 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 SMIM21Q3B7S5 101 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 CHRFAM7AQ494W8 412 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 DCAF12L2Q5VW00 463 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 WDR25Q64LD2 544 aaPredicted RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 STUMQ69YW2 141 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 PRSS48Q7RTY5 328 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 ANGPTL5Q86XS5 388 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 CALHM1Q8IU99 346 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 SGCDQ92629 289 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 TMEM106AQ96A25 262 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 WDR13Q9H1Z4 485 aa12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 FN1P02751 2386 aaKnown RBP12.54□□□□□ -0.4
IGHV3-53-201ENST00000390627 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 KIAA1324LA8MWY0 1029 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 J3QLI3 93 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 NXPH2O95156 264 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 CYB5AP00167 134 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 PLATP00750 562 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 ACAA1P09110 424 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 CELP19835 753 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 RAB3AP20336 220 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 MED22Q15528 200 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 FAHD2BQ6P2I3 314 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 THRSPQ92748 146 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 SEH1LQ96EE3 360 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 FAHD2AQ96GK7 314 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 NRIP2Q9BQI9 281 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 BEX2Q9BXY8 128 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 SNTG1Q9NSN8 517 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 CTSZQ9UBR2 303 aa12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 LSM2Q9Y333 95 aaKnown RBP12.53□□□□□ -0.4
IGHV3-53-201ENST00000390627 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.4
IGHV3-53-201ENST00000390627 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 OR2AT4A6NND4 320 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 MAGEB3O15480 346 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 HCKP08631 526 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 POU3F4P49335 361 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 GABARAPL2P60520 117 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 PPP3R1P63098 170 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 Q499Y3 187 aa12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 ATPAF1Q5TC12 328 aaPredicted RBP12.52□□□□□ -0.41
IGHV3-53-201ENST00000390627 ZNF841Q6ZN19 808 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms