RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RPL12P30050 165 aaKnown RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 BSGP35613 385 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 ARRB1P49407 418 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 BLKP51451 505 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 BIDP55957 195 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SCAND1P57086 179 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 HIST1H3AP68431 136 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 ADAM8P78325 824 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 IL15RAQ13261 267 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 RAB11BQ15907 218 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 MORN2Q502X0 79 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 D2HGDHQ8N465 521 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 OR52E1Q8NGJ3 308 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 GPR146Q96CH1 333 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 CMC2Q9NRP2 79 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 KLK13Q9UKR3 277 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 IKZF2Q9UKS7 526 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SPTBP11277 2137 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 B4DEV8 164 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 STK17BO94768 372 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 CHRM2P08172 466 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SOX2P48431 317 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 KHKP50053 298 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 ARF6P62330 175 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 HLA-DRB3P79483 266 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM183BQ1AE95 376 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 TPTE2P1Q5T6R2 138 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 OR4C11Q6IEV9 310 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SELENOHQ8IZQ5 122 aaKnown RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 OR2L13Q8N349 312 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 POC1AQ8NBT0 407 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 RPS4Y2Q8TD47 263 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 AQP3Q92482 292 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 CTHRC1Q96CG8 243 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 MS4A10Q96PG2 267 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SH3BGRL3Q9H299 93 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 ADAP2Q9NPF8 381 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 MMP17Q9ULZ9 603 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 A0A0A6YYD5 115 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 A0A1B0GU03 582 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 A0A1W2PPV9 198 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 VSTM2BA6NLU5 285 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 PDGFBP01127 241 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 PET100P0DJ07 73 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 EPHA8P29322 1005 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 PBX2P40425 430 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 CSNK1G2P78368 415 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 DECR1Q16698 335 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 OR2M7Q8NG81 312 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM170AQ8WVE7 144 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 ERGIC1Q969X5 290 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 OR6C1Q96RD1 312 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 TUBG2Q9NRH3 451 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 KLHL28Q9NXS3 571 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 RCL1Q9Y2P8 373 aaKnown RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 STRAPQ9Y3F4 350 aaKnown RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 LIPGQ9Y5X9 500 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 MDC1Q14676 2089 aaKnown RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 A0A1W2PQU0 124 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CLEC18AA5D8T8 446 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 FGF17O60258 216 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 WDR1O75083 606 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF217O75362 1048 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 STAG3L3P0CL85 134 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF708P17019 499 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 MAKP20794 623 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 IL24Q13007 206 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 C9orf50Q5SZB4 431 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 C17orf78Q8N4C9 275 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CLEC18CQ8NCF0 446 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 SMRP1Q8NCR6 262 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 OR2AJ1Q8NGZ0 328 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 SUN3Q8TAQ9 357 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 DYRK2Q92630 601 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 RNF166Q96A37 237 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 ZMYND19Q96E35 227 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 MEGF9Q9H1U4 602 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 ZMAT3Q9HA38 289 aaKnown RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 LYRM4Q9HD34 91 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 RAB18Q9NP72 206 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 SOHLH2Q9NX45 425 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CLEC1BQ9P126 229 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 P2RX2Q9UBL9 471 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CD207Q9UJ71 328 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CDV3Q9UKY7 258 aaKnown RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 FUT9Q9Y231 359 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 LAMTOR2Q9Y2Q5 125 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 PRSS38A1L453 326 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 OTOL1A6NHN0 477 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CD55P08174 381 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 GLRA1P23415 457 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 CNN3Q15417 329 aaKnown RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 WDR25Q64LD2 544 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM156Q8N614 296 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 OR10S1Q8NGN2 331 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 OR5AR1Q8NGP9 310 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 OR2A1Q8NGT9 310 aa6.59□□□□□ -1.35
CDKL5-201ENST00000379989 FAM213BQ8TBF2 198 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms