RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 OR5B3Q8NH48 314 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 SH2D1BO14796 132 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 ZIC2O95409 532 aaPredicted RBP13.01□□□□□ -0.33
PRDM16-203ENST00000378391 PCBP4P57723 403 aaKnown RBP13.01□□□□□ -0.33
PRDM16-203ENST00000378391 GSG1Q2KHT4 349 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 LSRQ86X29 649 aaPredicted RBP13.01□□□□□ -0.33
PRDM16-203ENST00000378391 SHARPINQ9H0F6 387 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 HDGFL3Q9Y3E1 203 aa13.01□□□□□ -0.33
PRDM16-203ENST00000378391 NPY1RP25929 384 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 PSMB2P49721 201 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 ZNF770Q6IQ21 691 aaPredicted RBP13□□□□□ -0.33
PRDM16-203ENST00000378391 RDH5Q92781 318 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 IL22RA2Q969J5 263 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 PITPNC1Q9UKF7 332 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 hCG_1809904A0A1W2PP81 198 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 A0A1W2PPE2 198 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 A0A1W2PR64 198 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 A0A1W2PRV1 198 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 XKRY2A2RUG3 117 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 SUB1P53999 127 aaKnown RBP eCLIP13□□□□□ -0.33
PRDM16-203ENST00000378391 CDONQ4KMG0 1287 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 PLA1AQ53H76 456 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 ASCL4Q6XD76 172 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 ABHD1Q96SE0 405 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 DHHO43323 396 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 ZFPL1O95159 310 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 CST4P01036 141 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 TIGITQ495A1 244 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 CISD2Q8N5K1 135 aaKnown RBP13□□□□□ -0.33
PRDM16-203ENST00000378391 RPUSD4Q96CM3 377 aaKnown RBP13□□□□□ -0.33
PRDM16-203ENST00000378391 PACRGQ96M98 296 aaPredicted RBP13□□□□□ -0.33
PRDM16-203ENST00000378391 ZNF430Q9H8G1 570 aaPredicted RBP13□□□□□ -0.33
PRDM16-203ENST00000378391 NRG2O14511 850 aaPredicted RBP13□□□□□ -0.33
PRDM16-203ENST00000378391 IGHV3-9P01782 118 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 TEX30Q5JUR7 227 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 ANKRD10Q9NXR5 420 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 ST3GAL6Q9Y274 331 aa13□□□□□ -0.33
PRDM16-203ENST00000378391 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 LANCL1O43813 399 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 CD99P14209 185 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 ARR3P36575 388 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 AKR1C3P42330 323 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 LIMS1P48059 325 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 ZNF121P58317 390 aaPredicted RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 MMP25Q9NPA2 562 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 FAM221AA4D161 298 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 SOX15O60248 233 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 GSK3AP49840 483 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 TAS2R45P59539 299 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 RBPJQ06330 500 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 DMWDQ09019 674 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 CLN3Q13286 438 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 HIST3H3Q16695 136 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 HES3Q5TGS1 186 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 FA2HQ7L5A8 372 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 YRDCQ86U90 279 aaKnown RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 GPR137Q96N19 417 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 CACFD1Q9UGQ2 172 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 HAND1O96004 215 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 HTRA3P83110 453 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.339e-6■■■□□ 18.8
PRDM16-203ENST00000378391 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 OR4S1Q8NGB4 309 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 PRRX2Q99811 253 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 RSRP1Q9BUV0 290 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 LRP12Q9Y561 859 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 KIAA0100Q14667 2235 aaKnown RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 A0A1W2PNV4 684 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 GP1BAP07359 652 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 FPR2P25090 351 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 THBS4P35443 961 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 SUCLG1P53597 346 aaKnown RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 UBE2G1P62253 170 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 OR8G1Q15617 311 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 OR8B8Q15620 311 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 SLC35E1Q96K37 410 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 CHST6Q9GZX3 395 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 ELF5Q9UKW6 265 aaPredicted RBP12.99□□□□□ -0.33
PRDM16-203ENST00000378391 RLFQ13129 1914 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 HMSDA8MTL9 139 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 CXCL10P02778 98 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 ZNF528Q3MIS6 628 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 SLC25A30Q5SVS4 291 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 NCR3LG1Q68D85 454 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 BATF2Q8N1L9 274 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 OSR2Q8N2R0 312 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 MMP26Q9NRE1 261 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 SIT1Q9Y3P8 196 aa12.99□□□□□ -0.33
PRDM16-203ENST00000378391 GPR31O00270 319 aa12.98□□□□□ -0.33
PRDM16-203ENST00000378391 AKR1E2Q96JD6 320 aa12.98□□□□□ -0.33
PRDM16-203ENST00000378391 C4orf45Q96LM5 186 aa12.98□□□□□ -0.33
PRDM16-203ENST00000378391 HES4Q9HCC6 221 aa12.98□□□□□ -0.33
PRDM16-203ENST00000378391 KCNJ3P48549 501 aa12.98□□□□□ -0.33
PRDM16-203ENST00000378391 COMPP49747 757 aaPredicted RBP12.98□□□□□ -0.33
PRDM16-203ENST00000378391 CRYBA2P53672 197 aa12.98□□□□□ -0.33
PRDM16-203ENST00000378391 DHRS2Q13268 280 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms