RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 NRN1LQ496H8 165 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 RIPPLY2Q5TAB7 128 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CDCP2Q5VXM1 449 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 DHRS11Q6UWP2 260 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 KCNE4Q8WWG9 221 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 HDHD3Q9BSH5 251 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 LDAHQ9H6V9 325 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 PIGLQ9Y2B2 252 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CRYM-AS1A6NIL9 109 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CRTAPO75718 401 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 DLSTP36957 453 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF273Q14593 569 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF283Q8N7M2 679 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 LYPD6BQ8NI32 183 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 C1QTNF5Q9BXJ0 243 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 HPF1Q9NWY4 346 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 TCFL5Q9UL49 500 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZDHHC8Q9ULC8 765 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 COLQQ9Y215 455 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 NOP16Q9Y3C1 178 aaKnown RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ADAP1O75689 374 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 NEURL1O76050 574 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 FABP1P07148 127 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 NPY4RP50391 375 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CSNK2A1P68400 391 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 FAM3AP98173 230 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 PSG4Q00888 419 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF774Q6NX45 483 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 RPS19BP1Q86WX3 136 aaKnown RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 LRRC18Q8N456 261 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CT55Q8WUE5 264 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 HPSE2Q8WWQ2 592 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF883P0CG24 379 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 CNR1P21554 472 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 PSMB6P28072 239 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 PCP4P48539 62 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 LHX2P50458 406 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 NUBP1P53384 320 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 TMEM268Q5VZI3 342 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 SP5Q6BEB4 398 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-202ENST00000376659 OR4A4PQ8NGN8 299 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 OR10K1Q8NGX5 313 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 SCRT1Q9BWW7 348 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 ARV1Q9H2C2 271 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 CSAG2Q9Y5P2 127 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 C9orf172C9J069 976 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 TEX46H3BTG2 121 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 RPL36A-HNRNPH2H7BZ11 118 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 RNF224P0DH78 156 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 C6orf201Q7Z4U5 140 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 PDZD9Q8IXQ8 264 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 LRTM2Q8N967 370 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 CPEB3Q8NE35 698 aaKnown RBP8.31□□□□□ -1.08
TRIM39-202ENST00000376659 OR2AE1Q8NHA4 323 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 OR2H1Q9GZK4 316 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF703Q9H7S9 590 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-202ENST00000376659 DMXL1Q9Y485 3027 aa8.31□□□□□ -1.08
TRIM39-202ENST00000376659 LOC100509620A0A075B734 347 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SIGLEC5O15389 551 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 CER1O95813 267 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 NR2C1P13056 603 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 HOXA1P49639 335 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SIGLEC14Q08ET2 396 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 RAET1LQ5VY80 246 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 Q6ZS49 121 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF101Q8IZC7 436 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 CHST4Q8NCG5 386 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 OR5D18Q8NGL1 313 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 OR51F2Q8NH61 342 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 OR1F12Q8NHA8 337 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SPSB1Q96BD6 273 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PGAM5Q96HS1 289 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SGCZQ96LD1 299 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 AK3Q9UIJ7 227 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 NSG1A0A0A6YYJ2 146 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PLATP00750 562 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 HCKP08631 526 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 FCGR3AP08637 254 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PGAM2P15259 253 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF708P17019 499 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 GLRA1P23415 457 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 PMELP40967 661 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 FOLR3P41439 243 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 KCNJ3P48549 501 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 MEOX2P50222 304 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SNU13P55769 128 aaKnown RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 CLDN18P56856 261 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 GMFBP60983 142 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 MAFIPQ8WZ33 124 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 MR1Q95460 341 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 REEP6Q96HR9 211 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 SULT4A1Q9BR01 284 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 NAA11Q9BSU3 229 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 CRLF2Q9HC73 371 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 GPR35Q9HC97 309 aa8.3□□□□□ -1.08
TRIM39-202ENST00000376659 CHMP1AQ9HD42 196 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-202ENST00000376659 DKKL1Q9UK85 242 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms