RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PLXDC2Q6UX71 529 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 SULF2Q8IWU5 870 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 ZIC4Q8N9L1 334 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 SLC30A7Q8NEW0 376 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 UCN2Q96RP3 112 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 RTBDNQ9BSG5 229 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-203ENST00000374490 ST6GALNAC5Q9BVH7 336 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 DDA1Q9BW61 102 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
HMGCL-203ENST00000374490 IGHV3-15A0A0B4J1V0 119 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 E9PLN8 166 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 LGALS8O00214 317 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 TNFSF11O14788 317 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 SGCEO43556 437 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 MT-CO3P00414 261 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 ANOS1P23352 680 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 CHAF1BQ13112 559 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 CRIP3Q6Q6R5 217 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 RTN4RL2Q86UN3 420 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 LRRC18Q8N456 261 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 MARC2Q969Z3 335 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
HMGCL-203ENST00000374490 CCDC187A0A096LP49 1063 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 FGF16O43320 207 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 PGAM2P15259 253 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 SLC9A3R2Q15599 337 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 RSPO1Q2MKA7 263 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-203ENST00000374490 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 AADACL3Q5VUY0 350 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 CDCP2Q5VXM1 449 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 DHRS13Q6UX07 377 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 C6orf15Q6UXA7 325 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-203ENST00000374490 OR5D18Q8NGL1 313 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 NPRL2Q8WTW4 380 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 Q96M66 194 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 SRXN1Q9BYN0 137 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 ELL3Q9HB65 397 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-203ENST00000374490 PADI1Q9ULC6 663 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 HSF4Q9ULV5 492 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
HMGCL-203ENST00000374490 AKAP13Q12802 2813 aa12.17□□□□□ -0.46
HMGCL-203ENST00000374490 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 C5orf63A6NC05 138 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 TAAR5O14804 337 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 SYNGR3O43761 229 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 SERPINA5P05154 406 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-203ENST00000374490 RBMXP38159 391 aaKnown RBP12.16□□□□□ -0.46
HMGCL-203ENST00000374490 B3GALT5-AS1P59052 145 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 PCBD1P61457 104 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
HMGCL-203ENST00000374490 BTN1A1Q13410 526 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 STK11Q15831 433 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 BEX5Q5H9J7 111 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 TMEM164Q5U3C3 297 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 LHFPL2Q6ZUX7 228 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 POC1AQ8NBT0 407 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 PIGTQ969N2 578 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 SGK3Q96BR1 496 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 FBXO17Q96EF6 278 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 TECTBQ96PL2 329 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 METTL8Q9H825 291 aaKnown RBP12.16□□□□□ -0.46
HMGCL-203ENST00000374490 PCDHB16Q9NRJ7 776 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 TMEM38BQ9NVV0 291 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 C1orf123Q9NWV4 160 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 WDFY3Q8IZQ1 3526 aa12.16□□□□□ -0.46
HMGCL-203ENST00000374490 CSTBP04080 98 aaKnown RBP12.15□□□□□ -0.46
HMGCL-203ENST00000374490 TMEM225BP0DP42 221 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 RPS2P15880 293 aaKnown RBP12.15□□□□□ -0.46
HMGCL-203ENST00000374490 DTYMKP23919 212 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 MTCP1P56278 107 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 CARD18P57730 90 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 AIMP2Q13155 320 aaKnown RBP12.15□□□□□ -0.46
HMGCL-203ENST00000374490 ZNF273Q14593 569 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 KRTAP27-1Q3LI81 207 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 RIPPLY2Q5TAB7 128 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 ELP2Q6IA86 826 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 REEP6Q96HR9 211 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 FAM117AQ9C073 453 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 TMEM100Q9NV29 134 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 COQ3Q9NZJ6 369 aa12.15□□□□□ -0.46
HMGCL-203ENST00000374490 FREM2Q5SZK8 3169 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 OR6C6A6NF89 314 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 G3V3Y1 287 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 TSPAN4O14817 238 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms