RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 NEU1Q99519 415 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 HIST1H2BNQ99877 126 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 HIST1H2BMQ99879 126 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 VN1R1Q9GZP7 353 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 CHST5Q9GZS9 411 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 LYRM4Q9HD34 91 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 PRTFDC1Q9NRG1 225 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 THAP10Q9P2Z0 257 aaPredicted RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 NXT1Q9UKK6 140 aaKnown RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 FBXL21Q9UKT6 434 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 MCTS1Q9ULC4 181 aaKnown RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 LIPGQ9Y5X9 500 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 R4GMQ9 66 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 SHANK1Q9Y566 2161 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 IGKV1-9A0A0C4DH69 117 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 CCDC85CA6NKD9 419 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 RHPN2P1A8MT19 583 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 B4DGG1 531 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 NDUFS8O00217 210 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 RER1O15258 196 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 ANGPTL7O43827 346 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 CDC14BO60729 498 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 HPNP05981 417 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 CD55P08174 381 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 NR2C1P13056 603 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 MYF5P13349 255 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 HIST1H1DP16402 221 aaKnown RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 HOXA5P20719 270 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 EPHA1P21709 976 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 CRABP1P29762 137 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 SLC6A9P48067 706 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 RAB38P57729 211 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 RAP1AP62834 184 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 NAAAQ02083 359 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 CHAF1BQ13112 559 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 IL15RAQ13261 267 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 C1orf140Q5VVS0 124 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 WDR25Q64LD2 544 aaPredicted RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF880Q6PDB4 577 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 OR5AS1Q8N127 324 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 SLC43A2Q8N370 569 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 NECAP1Q8NC96 275 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 OR5L1Q8NGL2 311 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF519Q8TB69 540 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 POC1BQ8TC44 478 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 ABHD5Q8WTS1 349 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 PTPMT1Q8WUK0 201 aaPredicted RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 FRZBQ92765 325 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 PIGTQ969N2 578 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 RAB39BQ96DA2 213 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 MVB12AQ96EY5 273 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 SNX22Q96L94 193 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 C2orf50Q96LR7 162 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 C1orf147Q96MC9 270 aaPredicted RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF2Q9BSG1 426 aaPredicted RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 PBOV1Q9GZY1 135 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 IGFLR1Q9H665 355 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 MYOZ1Q9NP98 299 aaPredicted RBP4.76□□□□□ -1.65
ATG4A-204ENST00000372246 C19orf12Q9NSK7 152 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 TREM2Q9NZC2 230 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 WASF3Q9UPY6 502 aa4.76□□□□□ -1.65
ATG4A-204ENST00000372246 DOCK8Q8NF50 2099 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CEP290O15078 2479 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 A0A087X0M5 115 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 A0A1B0GX30 115 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 BTBD17A6NE02 478 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 FAM24AA6NFZ4 105 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 H3BQ15 152 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 EREGO14944 169 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CIDEAO60543 219 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CST4P01036 141 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 MMP7P09237 267 aaPredicted RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 PGA4P0DJD7 388 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 PGA5P0DJD9 388 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF823P16415 610 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF17P17021 662 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 RAB4AP20338 218 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 BLVRBP30043 206 aaPredicted RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TAGLN2P37802 199 aaKnown RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CX3CR1P49238 355 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 GFERP55789 205 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 STARD6P59095 220 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 RPS21P63220 83 aaKnown RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 FOXO1Q12778 655 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 PNLIPRP3Q17RR3 467 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 IZUMO4Q1ZYL8 232 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM196Q5HYL7 178 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 C1orf100Q5SVJ3 147 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 MEX3BQ6ZN04 569 aaKnown RBP4.75□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM123Q8N131 208 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CYB561D1Q8N8Q1 229 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 OR51T1Q8NGJ9 327 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 STT3BQ8TCJ2 826 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 C11orf40Q8WZ69 217 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 ASB16Q96NS5 453 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 CDC6Q99741 560 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 PRRX2Q99811 253 aa4.75□□□□□ -1.65
ATG4A-204ENST00000372246 FBRSQ9HAH7 460 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms