RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SOX21Q9Y651 276 aaPredicted RBP12.16□□□□□ -0.46
SF3B5-201ENST00000367569 AUP1Q9Y679 476 aa12.16□□□□□ -0.46
SF3B5-201ENST00000367569 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 PNMA8CA0A1B0GUJ8 204 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 NKX6-3A6NJ46 265 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 ZFPL1O95159 310 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 LALBAP00709 142 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 SFTPBP07988 381 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 CALCBP10092 127 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 SOX2P48431 317 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 POU3F4P49335 361 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 GBX2P52951 348 aaPredicted RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 SNU13P55769 128 aaKnown RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 HILS1P60008 231 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 SCGB2A2Q13296 93 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 IL18R1Q13478 541 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 KCNJ8Q15842 424 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 FDX2Q6P4F2 183 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 Q6ZSR3 168 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 OR13C5Q8NGS8 318 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 SGCDQ92629 289 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 GGHQ92820 318 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 DACT3Q96B18 629 aaPredicted RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 TMIGD2Q96BF3 282 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 MRI1Q9BV20 369 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 INPP5EQ9NRR6 644 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
SF3B5-201ENST00000367569 NLKQ9UBE8 527 aa12.15□□□□□ -0.46
SF3B5-201ENST00000367569 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 IGKV1-9A0A0C4DH69 117 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 OR2AT4A6NND4 320 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 DHRS7CA6NNS2 312 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 F8VVB4 439 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 F8VWA3 439 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 H0YAE9 185 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 J3QLI3 93 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 GATBO75879 557 aaKnown RBP12.14□□□□□ -0.47
SF3B5-201ENST00000367569 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 MUC1P15941 1255 aaPredicted RBP12.14□□□□□ -0.47
SF3B5-201ENST00000367569 MYL12AP19105 171 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 DLX1P56177 255 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 FGF12P61328 243 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 DGUOKQ16854 277 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 KLF17Q5JT82 389 aaPredicted RBP12.14□□□□□ -0.47
SF3B5-201ENST00000367569 TMEM244Q5VVB8 128 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 BTNL3Q6UXE8 466 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 IZUMO2Q6UXV1 221 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 USP43Q70EL4 1123 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 BTN2A1Q7KYR7 527 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 KRT74Q7RTS7 529 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 KCTD20Q7Z5Y7 419 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 POC1AQ8NBT0 407 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 TMEM185AQ8NFB2 350 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 OR5D18Q8NGL1 313 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 RAB40AQ8WXH6 277 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 GATAD2BQ8WXI9 593 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 TFAP2CQ92754 450 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 ORAI1Q96D31 301 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 BORCS8Q96FH0 119 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 PCGF1Q9BSM1 259 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 TRIM36Q9NQ86 728 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 IL36RNQ9UBH0 155 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 OR14J1Q9UGF5 321 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 HHLA2Q9UM44 414 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
SF3B5-201ENST00000367569 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
SF3B5-201ENST00000367569 POLR3KQ9Y2Y1 108 aaPredicted RBP12.14□□□□□ -0.47
SF3B5-201ENST00000367569 SIRT4Q9Y6E7 314 aaPredicted RBP12.14□□□□□ -0.47
SF3B5-201ENST00000367569 TRBV2A0A0J9YWF9 115 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 MEX3AA1L020 520 aaKnown RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 SPRY1O43609 319 aaPredicted RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 NXPH2O95156 264 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 FSTL3O95633 263 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 FSHBP01225 129 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 PSG2P11465 335 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 GATA3P23771 443 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 DCKP27707 260 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 CCR9P51686 369 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 ACTG1P63261 375 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 ST3GAL4Q11206 333 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 CDK5R1Q15078 307 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 SLC25A26Q70HW3 274 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 ZNF573Q86YE8 665 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 PDZD9Q8IXQ8 264 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 BCL6BQ8N143 479 aaPredicted RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms