RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CDC14BO60729 498 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ADAP1O75689 374 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 HEXAP06865 529 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 HLA-GP17693 338 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 IFITM2Q01629 132 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 FOXO1Q12778 655 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 CLEC18BQ6UXF7 455 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 TNFSF18Q9UNG2 199 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 RNF24Q9Y225 148 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF253O75346 499 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 CER1O95813 267 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 SEC11BP0C7V7 166 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 RAB7AP51149 207 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 TMEM147Q9BVK8 224 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 C20orf141Q9NUB4 165 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF391Q9UJN7 358 aa11.38□□□□□ -0.59
SYNCRIP-201ENST00000355238 RHOBP62745 196 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 CLN3Q13286 438 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR10G8Q8NGN5 311 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 PCDHGA9Q9Y5G4 932 aaKnown RBP11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 C5orf49A4QMS7 147 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 MFSD2BA6NFX1 497 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 GEMIN2O14893 280 aaKnown RBP11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 FBXL14Q8N1E6 418 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR2M7Q8NG81 312 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 NEU3Q9UQ49 428 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 LINC01553A4QN01 128 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 SEMA7AO75326 666 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 NRIP2Q9BQI9 281 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR1A1Q9P1Q5 309 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 CD207Q9UJ71 328 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 SH3BGRL2Q9UJC5 107 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 FUT9Q9Y231 359 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 SOX15O60248 233 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 DEFB103AP81534 67 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 FUT7Q11130 342 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 OTPQ5XKR4 325 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 ROBO4Q8WZ75 1007 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 ALX4Q9H161 411 aaPredicted RBP11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 SLC25A22Q9H936 323 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 PDE4DIPQ5VU43 2346 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 B2MP61769 119 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF718Q3SXZ3 478 aa11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 BCL2L2Q92843 193 aaPredicted RBP11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 MRPS24Q96EL2 167 aaKnown RBP11.37□□□□□ -0.59
SYNCRIP-201ENST00000355238 CYB561P49447 251 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 MRGPREQ86SM8 312 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 MCHR2Q969V1 340 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 MVB12AQ96EY5 273 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 OCIAD1Q9NX40 245 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 ARID1BQ8NFD5 2236 aaPredicted RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 MAST2Q6P0Q8 1798 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 CXorf51AA0A1B0GTR3 108 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 DEDDO75618 318 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 EPPINO95925 133 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 DYNLT3P51808 116 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 KCNAB1Q14722 419 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 DCAF12Q5T6F0 453 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 KCNE4Q8WWG9 221 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 BOD1Q96IK1 185 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 ADAT1Q9BUB4 502 aaKnown RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 MSL2Q9HCI7 577 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 KLRC4-KLRK1H3BQV0 150 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 SPINK4O60575 86 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 PEX11BO96011 259 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 NDUFB7P17568 137 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 HTR1DP28221 377 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 B4GALNT1Q00973 533 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 IGFBP7Q16270 282 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 ATG101Q9BSB4 218 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAAP24Q9BTP7 215 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 PPP1R3EQ9H7J1 279 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 NUP98P52948 1817 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 NKX2-2O95096 273 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 FGF8P55075 233 aaPredicted RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 HLA-BQ31612 363 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 RPS19BP1Q86WX3 136 aaKnown RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 RHBDD1Q8TEB9 315 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 YIF1AO95070 293 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 GCGP01275 180 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 PGFP49763 221 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 NKAIN2Q5VXU1 208 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 UBE2ZQ9H832 354 aaPredicted RBP11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 CNTD2Q9H8S5 307 aa11.36□□□□□ -0.59
SYNCRIP-201ENST00000355238 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR10X1Q8NGY0 326 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 GHITMQ9H3K2 345 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 IGHV3-9P01782 118 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 CXCL2P19875 107 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAM3BP58499 235 aaPredicted RBP11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAM53BQ14153 422 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 HES1Q14469 280 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms