RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TNFSF14O43557 240 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 PCP4P48539 62 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 FXYD4P59646 89 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 JOSD1Q15040 202 aaPredicted RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 SGCBQ16585 318 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 RAB24Q969Q5 203 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 CCNL2Q96S94 520 aaPredicted RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 NXF5Q9H1B4 397 aaKnown RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 HRASLS2Q9NWW9 162 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 SEC16AO15027 2179 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 A6NIZ1 184 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 PRR19A6NJB7 356 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 OR5AC1P0C628 307 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 IL11P20809 199 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 ATP6V0CP27449 155 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 PIGPP57054 158 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 RAP1BP61224 184 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 SLC10A1Q14973 349 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 PHLDA2Q53GA4 152 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 TMEM123Q8N131 208 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 HDHD3Q9BSH5 251 aaPredicted RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 VSX1Q9NZR4 365 aaPredicted RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 PADI1Q9ULC6 663 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 CCDC187A0A096LP49 1063 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 MYOGP15173 224 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 CD200P41217 278 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 RPL23AP62750 156 aaKnown RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 FZD2Q14332 565 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 OGFOD3Q6PK18 319 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 SUMF1Q8NBK3 374 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 OR13D1Q8NGV5 346 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 SLAMF6Q96DU3 332 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 NOL4LQ96MY1 436 aaPredicted RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 FAM60AQ9NP50 221 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 FAM221AA4D161 298 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 FAM24AA6NFZ4 105 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 H0YIG0 161 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 AMBPP02760 352 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 SLC37A1P57057 533 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
LMNA-201ENST00000347559 DNLZQ5SXM8 178 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 SPSB3Q6PJ21 355 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 BAHD1Q8TBE0 780 aaPredicted RBP13.49□□□□□ -0.25
LMNA-201ENST00000347559 CBLN4Q9NTU7 201 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 FAM206AQ9NX38 181 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 MED29Q9NX70 200 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 SLC7A11Q9UPY5 501 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 DHRS7CA6NNS2 312 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 HPNP05981 417 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 TUBG1P23258 451 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 RAB11AP62491 216 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 ABCA11PQ4W5N1 156 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 FNDC7Q5VTL7 733 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 C1orf147Q96MC9 270 aaPredicted RBP13.49□□□□□ -0.25
LMNA-201ENST00000347559 SNHG12Q9BXW3 62 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 METTL9Q9H1A3 318 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 ANAPC10Q9UM13 185 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 POLR1DQ9Y2S0 133 aa13.49□□□□□ -0.25
LMNA-201ENST00000347559 ASCC3Q8N3C0 2202 aaKnown RBP13.49□□□□□ -0.25
LMNA-201ENST00000347559 COL4A6Q14031 1691 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 TNFSF12O43508 249 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 CXCL10P02778 98 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 PGA3P0DJD8 388 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 MMP16P51512 607 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 HLA-DRB3P79483 266 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 GPM6BQ13491 265 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 ICAM4Q14773 271 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 ZNF248Q8NDW4 579 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 OR5L1Q8NGL2 311 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 RHBDD1Q8TEB9 315 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 OR8D2Q9GZM6 311 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 PNO1Q9NRX1 252 aaKnown RBP13.48□□□□□ -0.25
LMNA-201ENST00000347559 PCNX3Q9H6A9 2034 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 KLF8O95600 359 aaPredicted RBP13.48□□□□□ -0.25
LMNA-201ENST00000347559 RPS21P63220 83 aaKnown RBP13.48□□□□□ -0.25
LMNA-201ENST00000347559 GPR157Q5UAW9 335 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 C1QL2Q7Z5L3 287 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 WDFY1Q8IWB7 410 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 OR5AS1Q8N127 324 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 OR6X1Q8NH79 312 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 EMC6Q9BV81 110 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 NXT1Q9UKK6 140 aaKnown RBP13.48□□□□□ -0.25
LMNA-201ENST00000347559 DOCK8Q8NF50 2099 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 ST8SIA3O43173 380 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 TMEM225BP0DP42 221 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 GP1BBP13224 206 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 MMP9P14780 707 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 LMO1P25800 156 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 ALDH3B1P43353 468 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 CLEC12BQ2HXU8 276 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 C6orf201Q7Z4U5 140 aa13.48□□□□□ -0.25
LMNA-201ENST00000347559 CRYM-AS1A6NIL9 109 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 ONECUT2O95948 504 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 THEGLP0DJG4 465 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 GABRR1P24046 479 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 NUBP1P53384 320 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 RUNX1Q01196 453 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 MEX3BQ6ZN04 569 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms