RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZNF385AQ96PM9 386 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 TAS2R5Q9NYW4 299 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 MLXQ9UH92 298 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 FFAR1O14842 300 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 SMIM18P0DKX4 95 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 HOXB1P14653 301 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 FBXW5Q969U6 566 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 YIPF6Q96EC8 236 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 COPS3Q9UNS2 423 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 C8orf82Q6P1X6 216 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 OR1S2Q8NGQ3 325 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 LIPGQ9Y5X9 500 aa14.45□□□□□ -0.1
SMARCA4-201ENST00000344626 ARPC4-TTLL3A0A0A6YYG9 625 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 XRCC3O43542 346 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 OMGP23515 440 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 HNF4GQ14541 408 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 ZNF266Q14584 549 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 OR51A4Q8NGJ6 313 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 GPX8Q8TED1 209 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 RPEQ96AT9 228 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 RNF167Q9H6Y7 350 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 DFFBO76075 338 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 SCAF4O95104 1147 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 ZFPL1O95159 310 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 PCMT1P22061 227 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 RAB7AP51149 207 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 OR6C3Q9NZP0 311 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 RNF7Q9UBF6 113 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 NEUROG3Q9Y4Z2 214 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 CCR6P51684 374 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 VMA21Q3ZAQ7 101 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 ZNF767PQ75MW2 155 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 OR8B12Q8NGG6 310 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 DIRC2Q96SL1 478 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 SFXN3Q9BWM7 321 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 OR5V1Q9UGF6 321 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 S100A2P29034 98 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 GPR6P46095 362 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 AKR1D1P51857 326 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 BEX5Q5H9J7 111 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 MDP1Q86V88 176 aa14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 C11orf54Q9H0W9 315 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 METTL17Q9H7H0 456 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-201ENST00000344626 TGM6O95932 706 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 RAB6AP20340 208 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 ZBTB25P24278 435 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 COX7A1P24310 79 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 NKX2-1P43699 371 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 RPS27AP62979 156 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 UBA52P62987 128 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 CTHRC1Q96CG8 243 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 SEC22AQ96IW7 307 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 SCAND1P57086 179 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 IGFBP7Q16270 282 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 OR10AD1Q8NGE0 317 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 UHRF2Q96PU4 802 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 MED13LQ71F56 2210 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 TNFSF12O43508 249 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 DXOO77932 396 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 PNPP00491 289 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 SSX9Q7RTT3 188 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 SUMF1Q8NBK3 374 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 TUBG2Q9NRH3 451 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 KCNMB2Q9Y691 235 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 SDCBPO00560 298 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 FOXD3Q9UJU5 478 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 CHD8Q9HCK8 2581 aa14.43□□□□□ -0.1
SMARCA4-201ENST00000344626 C4orf51C9J302 202 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 FGF9P31371 208 aaPredicted RBP14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 CCL8P80075 99 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 TBR1Q16650 682 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 ITPKCQ96DU7 683 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 TMEM210A6NLX4 147 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 CRHP06850 196 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 ARL3P36405 182 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 EVX1P49640 407 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 OR5T1Q8NG75 326 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 ORAI1Q96D31 301 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 AKR1E2Q96JD6 320 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 YIF1AO95070 293 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 DGCR2P98153 550 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 ADAM19Q9H013 955 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 SLC7A10Q9NS82 523 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 C1QTNF9BB2RNN3 333 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 C1QTNF9P0C862 333 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 ADRA2CP18825 462 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 GZMMP51124 257 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 RPL11P62913 178 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 SLC25A40Q8TBP6 338 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 MSL2Q9HCI7 577 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 COL4A6Q14031 1691 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 CYTIPO60759 359 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 LIMS3P0CW19 117 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 LIMS4P0CW20 117 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 BTG1P62324 171 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 FXNQ16595 210 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 FAM27BQ5VT28 67 aa14.42□□□□□ -0.1
SMARCA4-201ENST00000344626 DAZAP1Q96EP5 407 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms