RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZC4H2Q9NQZ6 224 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 C1orf123Q9NWV4 160 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 MASP2O00187 686 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 TMEM225BP0DP42 221 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 CTRB1P17538 263 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 NTF4P34130 210 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 DUSP3P51452 185 aaPredicted RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 CNN3Q15417 329 aaKnown RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 KCNE4Q8WWG9 221 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 ZNF2Q9BSG1 426 aaPredicted RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 NKX6-2Q9C056 277 aaPredicted RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 SLC5A7Q9GZV3 580 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 METTL9Q9H1A3 318 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 TMEM38BQ9NVV0 291 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 HSF4Q9ULV5 492 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 EDARQ9UNE0 448 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 MEMO1Q9Y316 297 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 ZNF716A6NP11 495 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 NUDT19A8MXV4 375 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 TOR1AO14656 332 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 ATG12O94817 140 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 HOXB5P09067 269 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 SCRN3Q0VDG4 424 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 LPAL2Q16609 132 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 GGNQ86UU5 652 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 OR1F12Q8NHA8 337 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 CPT1CQ8TCG5 803 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 HDHD3Q9BSH5 251 aaPredicted RBP12.68□□□□□ -0.38
TDP2-201ENST00000341060 ANXA10Q9UJ72 324 aa12.68□□□□□ -0.38
TDP2-201ENST00000341060 IGKV1-27A0A075B6S5 117 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 CCDC187A0A096LP49 1063 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 A0A0G2JMM0 328 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 A0A1W2PPB8 328 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 A0A1W2PRS3 328 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 TMEM218A2RU14 115 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 OR6C6A6NF89 314 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 KIR3DP1A8MWS1 328 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 PATE3B3GLJ2 98 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 MSTNO14793 375 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 ACTL6AO96019 429 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 P04436 131 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 CTSDP07339 412 aaPredicted RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 RBMXP38159 391 aaKnown RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 RSU1Q15404 277 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 KRTAP27-1Q3LI81 207 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 FREM2Q5SZK8 3169 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 TPD52L2O43399 206 aaKnown RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 SPRY1O43609 319 aaPredicted RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 ANGPTL7O43827 346 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 B4GALT1P15291 398 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 RBP2P50120 134 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 CARD18P57730 90 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 RBM39Q14498 530 aaKnown RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 ZNF528Q3MIS6 628 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 TMEM42Q69YG0 159 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 FAM122CQ6P4D5 195 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 YRDCQ86U90 279 aaKnown RBP12.67□□□□□ -0.38
TDP2-201ENST00000341060 OR14L1PQ8NHC6 308 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 SLC39A1Q9NY26 324 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 GSKIPQ9P0R6 139 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
TDP2-201ENST00000341060 ARID1AO14497 2285 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 FAM230AA0A1W2PPH8 454 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 CER1O95813 267 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 IGHEP01854 428 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 ZNF32P17041 273 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 S100A10P60903 97 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 TAF9Q16594 264 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 CCDC157Q569K6 752 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 ABLIM2Q6H8Q1 611 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 ASCL4Q6XD76 172 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 LHFPL2Q6ZUX7 228 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 FAM219AQ8IW50 185 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 ADAMTS17Q8TE56 1095 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 ACKR4Q9NPB9 350 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 LPAR3Q9UBY5 353 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 AK3Q9UIJ7 227 aa12.66□□□□□ -0.38
TDP2-201ENST00000341060 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 ABCD4O14678 606 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 TAAR5O14804 337 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 LCATP04180 440 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 SFTPBP07988 381 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 OR5H8P0DN80 308 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 ADCYAP1P18509 176 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 DTYMKP23919 212 aa12.65□□□□□ -0.38
TDP2-201ENST00000341060 AKR1C2P52895 323 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms