RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TMEM106AQ96A25 262 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 KIRREL1Q96J84 757 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 TSPAN32Q96QS1 320 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 MRM2Q9UI43 246 aaKnown RBP13.26□□□□□ -0.29
BRAT1-201ENST00000340611 HIF3AQ9Y2N7 669 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 ETV7Q9Y603 341 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 LRRC3CA6NJW4 275 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 FAM166BA8MTA8 275 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 CTAG2O75638 210 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 CD74P04233 296 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 CD1AP06126 327 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 OR4E1P0C645 316 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 PRKXP51817 358 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 WIPI1Q5MNZ9 446 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-201ENST00000340611 STEAP1BQ6NZ63 245 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF676Q8N7Q3 588 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 OR1J2Q8NGS2 313 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 NPRL2Q8WTW4 380 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 SRA1Q9HD15 236 aaKnown RBP13.26□□□□□ -0.29
BRAT1-201ENST00000340611 URGCP-MRPS24S4R325 110 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 IGLV3-32A0A0A0MS00 114 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF705GA8MUZ8 300 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-201ENST00000340611 KLK10O43240 276 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 ZNHIT1O43257 154 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 ITGA5P08648 1049 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 SULT1A1P50225 295 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 FAM220AQ7Z4H9 259 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 GALNTL5Q7Z4T8 443 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 FDCSPQ8NFU4 85 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 NUDCD2Q8WVJ2 157 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 SGCZQ96LD1 299 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 FER1L6-AS2Q96M78 137 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 EMC6Q9BV81 110 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 ZMAT3Q9HA38 289 aaKnown RBP13.26□□□□□ -0.29
BRAT1-201ENST00000340611 MED29Q9NX70 200 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 STEAP1Q9UHE8 339 aa13.26□□□□□ -0.29
BRAT1-201ENST00000340611 RP1L1Q8IWN7 2480 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-201ENST00000340611 C13orf42A0A1B0GVH6 325 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 FTCDNL1E5RQL4 147 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 UPK3AO75631 287 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 RAB4AP20338 218 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
BRAT1-201ENST00000340611 SLC35D3Q5M8T2 416 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 LINC01590Q5TEZ4 76 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF775Q96BV0 537 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-201ENST00000340611 PIK3IP1Q96FE7 263 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 SPACA1Q9HBV2 294 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF208O43345 1280 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 TLX3O43711 291 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-201ENST00000340611 CD82P27701 267 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 MSX1P28360 303 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 CD34P28906 385 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 PRSS3P35030 304 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 LPAR6P43657 344 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 SUMO3P55854 103 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-201ENST00000340611 MESTQ5EB52 335 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 IL34Q6ZMJ4 242 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 DNM1P46Q6ZS02 220 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 KCTD9Q7L273 389 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 OR14L1PQ8NHC6 308 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 SLC25A43Q8WUT9 341 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-201ENST00000340611 DCUN1D4Q92564 292 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 MRGPRX4Q96LA9 322 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 TMEM208Q9BTX3 173 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 BSNQ9UPA5 3926 aa13.25□□□□□ -0.29
BRAT1-201ENST00000340611 PPP1R2P9O14990 202 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 SFTPBP07988 381 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 GDF1P27539 372 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF684Q5T5D7 378 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 ANKRD16Q6P6B7 361 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 DPY19L2P2Q6ZN68 376 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 SULF2Q8IWU5 870 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 OR10AD1Q8NGE0 317 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 RPS4Y2Q8TD47 263 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 C15orf40Q8WUR7 153 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 ATG5Q9H1Y0 275 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 KLHL13Q9P2N7 655 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 A8MWP6 167 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 CD14P08571 375 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF345Q14585 488 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 ACKR1Q16570 336 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 C4orf17Q53FE4 359 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 THNSL2Q86YJ6 484 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 GABRG1Q8N1C3 465 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 CASTOR1Q8WTX7 329 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 CCDC107Q8WV48 283 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 MRI1Q9BV20 369 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 ZNF552Q9H707 407 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-201ENST00000340611 TAS2R8Q9NYW2 309 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 GRHPRQ9UBQ7 328 aa13.24□□□□□ -0.29
BRAT1-201ENST00000340611 A0A1B0GV50 99 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 MS4A18H0YCH9 400 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 PLPP3O14495 311 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 GLCEO94923 617 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 OR6A2O95222 327 aa13.23□□□□□ -0.29
BRAT1-201ENST00000340611 PRPS1P60891 318 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms