RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PIPOXQ9P0Z9 390 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 TIMM10BQ9Y5J6 103 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 CADP27708 2225 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 TNRC6AQ8NDV7 1962 aaKnown RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 A0A1B0GUH1 482 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 NAP1L6A6NFF2 107 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ZZEF1O43149 2961 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 RGS11O94810 467 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 CFDP00746 253 aaPredicted RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 NR2C1P13056 603 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 SELEP16581 610 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 MICBQ29980 383 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF529Q6P280 563 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 CNEP1R1Q8N9A8 125 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PNLDC1Q8NA58 520 aaKnown RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 MDS2Q8NDY4 140 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 OR4K15Q8NH41 348 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PPP1R14DQ9NXH3 145 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PTTG3PQ9NZH4 202 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 IL36RNQ9UBH0 155 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PLEKHA6Q9Y2H5 1048 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 NOP16Q9Y3C1 178 aaKnown RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 NME2P1O60361 137 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 IFNA6P05013 189 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 CELA3BP08861 270 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 OR4E1P0C645 316 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 NME2P22392 152 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 CASP6P55212 293 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF626Q68DY1 528 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PGAP1Q75T13 922 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PIP4P1Q86T03 277 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ST8SIA4Q92187 359 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 APH1AQ96BI3 265 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ELMOD3Q96FG2 381 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 CST11Q9H112 138 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 FN3KRPQ9HA64 309 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 PCDHGA1Q9Y5H4 931 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 MED12LQ86YW9 2145 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 TRGV5A0A0B4J1U4 118 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 UBE2QL1A1L167 161 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 KLRC4-KLRK1H3BQV0 150 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 LYZL6O75951 148 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 FARS2O95363 451 aaKnown RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 HLA-AP01891 365 aaKnown RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 HPNP05981 417 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ERCC1P07992 297 aaPredicted RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 GSK3AP49840 483 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 RAB1AP62820 205 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 MYPOPQ86VE0 399 aaPredicted RBP10.92□□□□□ -0.66
LIMK1-201ENST00000336180 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 HYLS1Q96M11 299 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF488Q96MN9 340 aa10.92□□□□□ -0.66
LIMK1-201ENST00000336180 IGKV1-12A0A0C4DH73 117 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 TM4SF5O14894 197 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 SLC22A5O76082 557 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 SFTPBP07988 381 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 HIST1H1DP16402 221 aaKnown RBP10.91□□□□□ -0.66
LIMK1-201ENST00000336180 NPBWR2P48146 333 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 SORDQ00796 357 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 ECH1Q13011 328 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 SLC9A3R2Q15599 337 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 OR56B2PQ8NGI1 322 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 KCNG3Q8TAE7 436 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 CHST5Q9GZS9 411 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 ASCL3Q9NQ33 180 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 MBD2Q9UBB5 411 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 CST2P09228 141 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 AMY2BP19961 511 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
LIMK1-201ENST00000336180 HIST1H3AP68431 136 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 FAM3AP98173 230 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 PPP1R1AQ13522 171 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 RSU1Q15404 277 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 HIST2H3PS2Q5TEC6 136 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 JMJD6Q6NYC1 403 aaPredicted RBP10.91□□□□□ -0.66
LIMK1-201ENST00000336180 DNM1P46Q6ZS02 220 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 HIST2H3AQ71DI3 136 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 BORCS8Q96FH0 119 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 TRIB1Q96RU8 372 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 NPDC1Q9NQX5 325 aaPredicted RBP10.91□□□□□ -0.66
LIMK1-201ENST00000336180 TAS2R8Q9NYW2 309 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 KLF13Q9Y2Y9 288 aaPredicted RBP10.91□□□□□ -0.66
LIMK1-201ENST00000336180 STARD10Q9Y365 291 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 SPTA1P02549 2419 aa10.91□□□□□ -0.66
LIMK1-201ENST00000336180 IGF2RP11717 2491 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 MEX3AA1L020 520 aaKnown RBP10.9□□□□□ -0.66
LIMK1-201ENST00000336180 F8VVB4 439 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 F8VWA3 439 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 GEMIN2O14893 280 aaKnown RBP10.9□□□□□ -0.66
LIMK1-201ENST00000336180 NRASP01111 189 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 FABP1P07148 127 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 CCL1P22362 96 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 RIPPLY1Q0D2K3 151 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 GK2Q14410 553 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-201ENST00000336180 FOXL2NBQ6ZUU3 175 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 CSNK2A3Q8NEV1 391 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms