RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 FAAP24Q9BTP7 215 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 LANCL2Q9NS86 450 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 LHFPL6Q9Y693 200 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 DOCK8Q8NF50 2099 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 IFITM10A6NMD0 228 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 SEMA4FO95754 770 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 ONECUT2O95948 504 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 THBS4P35443 961 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 FOXF1Q12946 379 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 ZNF239Q16600 458 aaKnown RBP12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 UNQ6494/PRO21346Q6UXR6 183 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 OR11L1Q8NGX0 322 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 PGAM5Q96HS1 289 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 VN1R1Q9GZP7 353 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 CUTCQ9NTM9 273 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 TGIF2-C20orf24A0A0A6YYL0 155 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 A6NIZ1 184 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 TNFRSF10CO14798 259 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 CYB5BO43169 146 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 SCGNO76038 276 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 GUSBP08236 651 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 MYF5P13349 255 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 TAS2R46P59540 309 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 UBE2KP61086 200 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 RAP1BP61224 184 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 SUCNR1Q9BXA5 334 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 PECRQ9BY49 303 aa12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 GAR1Q9NY12 217 aaKnown RBP12.56□□□□□ -0.4
CHRNA3-201ENST00000326828 OR5H8P0DN80 308 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 LYL1P12980 280 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 CHATP28329 748 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 FBXW12Q6X9E4 464 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 RTL10Q7L3V2 364 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 CXCL1P09341 107 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 QDPRP09417 244 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 DANCRP0C864 163 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 FABP4P15090 132 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 HTR5AP47898 357 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 GABREP78334 506 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 IL15RAQ13261 267 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 HMGN3Q15651 99 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 LIME1Q9H400 295 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 LIPGQ9Y5X9 500 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 PTPRSQ13332 1948 aa12.55□□□□□ -0.4
CHRNA3-201ENST00000326828 FIGNL2A6NMB9 653 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 SPRY1O43609 319 aaPredicted RBP12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 ZNF17P17021 662 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 RSU1Q15404 277 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 DEFB133Q30KQ1 61 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 SSX9Q7RTT3 188 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 CCDC54Q8NEL0 328 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 PBDC1Q9BVG4 233 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 SERINC1Q9NRX5 453 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 NCOA6Q14686 2063 aaPredicted RBP12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 C2orf16Q68DN1 1984 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 RALGAPA1Q6GYQ0 2036 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 FAM230AA0A1W2PPH8 454 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 FAM24AA6NFZ4 105 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 TRGC2P03986 189 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 FAM3AP98173 230 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 FZD2Q14332 565 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 UBAC2Q8NBM4 344 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 RAB39BQ96DA2 213 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 H3BQ15 152 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 TSPAN2O60636 221 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 GAMTQ14353 236 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 HNF4GQ14541 408 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 C5orf24Q7Z6I8 188 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 CHST11Q9NPF2 352 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
CHRNA3-201ENST00000326828 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 CST7O76096 145 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 HEXBP07686 556 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 IFI6P09912 130 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 DTX1Q86Y01 620 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 TAAR9Q96RI9 348 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 LRRC61Q9BV99 259 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 KCNIP3Q9Y2W7 256 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 GATCO43716 136 aaKnown RBP12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 SLC34A2O95436 690 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 CD63P08962 238 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 DBHP09172 617 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 RUNX1Q01196 453 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 DEGS2Q6QHC5 323 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 Q8WTZ3 238 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms