RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TLNRD1Q9H1K6 362 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 SONP18583 2426 aaKnown RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 TRBV5-3A0A0A0MS03 114 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 AKR7A3O95154 331 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 SLC35E2P0CK97 266 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 BRS3P32247 399 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 GABRA4P48169 554 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 CPEB2Q7Z5Q1 589 aaKnown RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 MKXQ8IYA7 352 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 THAP3Q8WTV1 239 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 HSPB8Q9UJY1 196 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 MARCH11A6NNE9 402 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 MSX1P28360 303 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 RABIFP47224 123 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 TAS2R45P59539 299 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 SELENOVP59797 346 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 NUTF2P61970 127 aaKnown RBP6.34□□□□□ -1.4
SMC1A-201ENST00000322213 NKAIN1Q4KMZ8 207 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 CDC20BQ86Y33 519 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF100Q8IYN0 542 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 DOK4Q8TEW6 326 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 R3HDM4Q96D70 268 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 SLCO1C1Q9NYB5 712 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 A0A1W2PP55 124 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 HSBP1O75506 76 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 ANKRD34CP0C6C1 535 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 PLGLB1Q02325 96 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 RPL18Q07020 188 aaKnown RBP6.34□□□□□ -1.4
SMC1A-201ENST00000322213 PWWP2BQ6NUJ5 590 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 C12orf54Q6X4T0 127 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 RABEPKQ7Z6M1 372 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 VN1R17PQ8TDU5 208 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 TCTN2Q96GX1 697 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 PBX4Q9BYU1 374 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 NAA60Q9H7X0 242 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 FBXO34Q9NWN3 711 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 PSENENQ9NZ42 101 aa6.34□□□□□ -1.4
SMC1A-201ENST00000322213 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.34□□□□□ -1.4
SMC1A-201ENST00000322213 DVL1O14640 695 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 RRP8O43159 456 aaKnown RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 SLC25A6P12236 298 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 UBE2G1P62253 170 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 RAB32Q13637 225 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF740Q8NDX6 193 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 FUT9Q9Y231 359 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 DSPPQ9NZW4 1301 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 KCNE1BA0A087WTH5 132 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 DNASE2O00115 360 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 IGLV3-27P01718 113 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 RAB7AP51149 207 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 SPATA45Q537H7 98 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 KHDC3LQ587J8 217 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 IGSF21Q96ID5 467 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 MACROD1Q9BQ69 325 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 VDAC3Q9Y277 283 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CLEC18AA5D8T8 446 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CST6Q15828 149 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 DMKNQ6E0U4 476 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CLEC18CQ8NCF0 446 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PHOSPHO2Q8TCD6 241 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 RGP1Q92546 391 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 VSIG4Q9Y279 399 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 A0A0B4J2E0 115 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 A0A1B0GX12 115 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 DIRC3C9JPN6 131 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 DUX1O43812 170 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CYB5R3P00387 301 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CD8AP01732 235 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 FOLR2P14207 255 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 FAM3AP98173 230 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 METRNLQ641Q3 311 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 TXNIPQ9H3M7 391 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 C19orf53Q9UNZ5 99 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 WASHC3Q9Y3C0 194 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 LRP4O75096 1905 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 TLN1Q9Y490 2541 aaKnown RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 DNAJC25-GNG10A0A024R161 153 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 TGM5O43548 720 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 GREM1O60565 184 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 RECKO95980 971 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 BMP5P22003 454 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 THBS4P35443 961 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 H2BFSP57053 126 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PAFAH1B2P68402 229 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 SPANXN5Q5MJ07 72 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 C1orf140Q5VVS0 124 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 SLC39A11Q8N1S5 342 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 ROBO4Q8WZ75 1007 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PIGCQ92535 297 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 TCRBV21S2A2A0A5A6 115 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PRKRAO75569 313 aaKnown RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 ACTL6BO94805 426 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 CRISP2P16562 243 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PPP2CBP62714 309 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 PPP2CAP67775 309 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 TMEM267Q0VDI3 215 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 RTL8BQ17RB0 113 aa6.33□□□□□ -1.4
SMC1A-201ENST00000322213 H1FNTQ75WM6 255 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-201ENST00000322213 ARRDC3Q96B67 414 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms