RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 KCNG3Q8TAE7 436 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 EDEM2Q9BV94 578 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 PCDH15Q96QU1 1955 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 A0A1W2PQF6 199 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 GEMIN2O14893 280 aaKnown RBP12.52□□□□□ -0.41
PABPC1-201ENST00000318607 IGHV3-9P01782 118 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 OR5H8P0DN80 308 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF16P17020 682 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-201ENST00000318607 RAB11AP62491 216 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 OR2T2Q6IF00 324 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 FAM166AQ6J272 317 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 RPS4Y2Q8TD47 263 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF160Q9HCG1 818 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 FER1L5A0AVI2 2057 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 PRAMEF26H0Y7S4 382 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 SSSCA1O60232 199 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 CST4P01036 141 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 CD1AP06126 327 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 MTCP1P56278 107 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 FOXF1Q12946 379 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 DNM1P34Q6PK57 102 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 NMES1Q9C002 83 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 GAR1Q9NY12 217 aaKnown RBP12.51□□□□□ -0.41
PABPC1-201ENST00000318607 OR5H15A6NDH6 313 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 FCGR3AP08637 254 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 MMP7P09237 267 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-201ENST00000318607 POLR2HP52434 150 aaKnown RBP12.51□□□□□ -0.41
PABPC1-201ENST00000318607 CASP6P55212 293 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 SPEM2Q0P670 501 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 KISS1Q15726 138 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 RNF212Q495C1 297 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 TEX30Q5JUR7 227 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 C9orf40Q8IXQ3 194 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-201ENST00000318607 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 HAS2Q92819 552 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 GPX7Q96SL4 187 aaPredicted RBP12.51□□□□□ -0.41
PABPC1-201ENST00000318607 CUTCQ9NTM9 273 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 GNG13Q9P2W3 67 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 KCNIP3Q9Y2W7 256 aa12.51□□□□□ -0.41
PABPC1-201ENST00000318607 NUP210Q8TEM1 1887 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-201ENST00000318607 F10P00742 488 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 LINC00271P0C7V0 271 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 GNRHRP30968 328 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 S100A12P80511 92 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 PPA1Q15181 289 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 MRPL38Q96DV4 380 aaKnown RBP12.5□□□□□ -0.41
PABPC1-201ENST00000318607 C1orf123Q9NWV4 160 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 MFNGO00587 321 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 TNFSF14O43557 240 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 JTBO76095 146 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 KIR2DL1P43626 348 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-201ENST00000318607 Q6ZS52 159 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 GKN2Q86XP6 184 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 TMEM156Q8N614 296 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 OR51B6Q9H340 312 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-201ENST00000318607 PLEK2Q9NYT0 353 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 MCTS1Q9ULC4 181 aaKnown RBP12.5□□□□□ -0.41
PABPC1-201ENST00000318607 PIGLQ9Y2B2 252 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 COL6A3P12111 3177 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 A0A087WZY1 265 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 PPP1R2P9O14990 202 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 HPNP05981 417 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 PCK2Q16822 640 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 EMC4Q5J8M3 183 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 HIST2H3PS2Q5TEC6 136 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 SKA3Q8IX90 412 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 C7orf61Q8IZ16 206 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 OR56B1Q8NGI3 324 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF442Q9H7R0 627 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 METTL7AQ9H8H3 244 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 RAB18Q9NP72 206 aa12.5□□□□□ -0.41
PABPC1-201ENST00000318607 CYTIPO60759 359 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 IL2RAP01589 272 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 MBPP02686 304 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 RPS18P62269 152 aaKnown RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 GABREP78334 506 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 DCDP81605 110 aaKnown RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 MRPS34P82930 218 aaKnown RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 FUT7Q11130 342 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 BATFQ16520 125 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 WDR25Q64LD2 544 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 MARS2Q96GW9 593 aaKnown RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 SLC17A5Q9NRA2 495 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 GFOD1Q9NXC2 390 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 ZDHHC8Q9ULC8 765 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 PIAS3Q9Y6X2 628 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 PRR14LQ5THK1 2151 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 E9PLN8 166 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 MASP2O00187 686 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 OR7C1O76099 320 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-201ENST00000318607 NDUFB7P17568 137 aa12.49□□□□□ -0.41
PABPC1-201ENST00000318607 CHATP28329 748 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms