RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ZNF160Q9HCG1 818 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 CMC2Q9NRP2 79 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SERINC1Q9NRX5 453 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 HSF4Q9ULV5 492 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SRPK3Q9UPE1 567 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF281Q9Y2X9 895 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 ETV7Q9Y603 341 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 TMEM269A0A1B0GVZ9 245 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 FAM171A2A8MVW0 826 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 PEX12O00623 359 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SLC16A5O15375 505 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 HKR1P10072 659 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 ACTC1P68032 377 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 ACTA1P68133 377 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 KCNMB1Q16558 191 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SLC22A6Q4U2R8 563 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 AADACL3Q5VUY0 350 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 FBXW9Q5XUX1 488 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 OR4C11Q6IEV9 310 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SUMF2Q8NBJ7 301 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 OR10A7Q8NGE5 316 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 OR9K2Q8NGE7 335 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 OR10AC1Q8NH08 325 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 WFIKKN1Q96NZ8 548 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 NEUROD4Q9HD90 331 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 CHST11Q9NPF2 352 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 GRHPRQ9UBQ7 328 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 WDR45Q9Y484 360 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 BSNQ9UPA5 3926 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 FITM1A5D6W6 292 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 CBY3A6NI87 242 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 PRR32B1ATL7 298 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 DFFBO76075 338 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 UMODP07911 640 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SLC2A5P22732 501 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 CD82P27701 267 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 CHATP28329 748 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 THBS4P35443 961 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 EMP2P54851 167 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 UCNP55089 124 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 ERVFC1-1P60608 527 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 UBE2KP61086 200 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 RAB32Q13637 225 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 DECR1Q16698 335 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 COX15Q7KZN9 410 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 RNF44Q7L0R7 432 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SLC25A42Q86VD7 318 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF101Q8IZC7 436 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 FDCSPQ8NFU4 85 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 OR51A4Q8NGJ6 313 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 SUN3Q8TAQ9 357 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 GPX8Q8TED1 209 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 STACQ99469 402 aa8.28□□□□□ -1.08
CAPN3-201ENST00000318023 TRBV6-7A0A0A0MS04 114 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 A8MXE2 369 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 H3BMH7 237 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 H3BQ15 152 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 CD37P11049 281 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 TBPP20226 339 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 SERPINA2P20848 420 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 EFNA3P52797 238 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 RPS15AP62244 130 aaKnown RBP8.27□□□□□ -1.09
CAPN3-201ENST00000318023 NSDHLQ15738 373 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 AWAT2Q6E213 333 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 PCSK4Q6UW60 755 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 KIRREL2Q6UWL6 708 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 SLC35F2Q8IXU6 374 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 KLHDC8AQ8IYD2 350 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 C17orf78Q8N4C9 275 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 OR6K6Q8NGW6 343 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 OR4K13Q8NH42 304 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 ZNRF4Q8WWF5 429 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 MRGPRFQ96AM1 343 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 SYT3Q9BQG1 590 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 ACTR3CQ9C0K3 210 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-201ENST00000318023 PCBD2Q9H0N5 130 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 PLA2G3Q9NZ20 509 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 RAB22AQ9UL26 194 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 RCL1Q9Y2P8 373 aaKnown RBP8.27□□□□□ -1.09
CAPN3-201ENST00000318023 ADAMTS20P59510 1910 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 PRH1P02810 166 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 PPP1CCP36873 323 aaKnown RBP8.27□□□□□ -1.09
CAPN3-201ENST00000318023 SLC37A1P57057 533 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 ACTA2P62736 377 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 ACTG2P63267 376 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 RAB35Q15286 201 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 C11orf42Q8N5U0 333 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 GAL3ST2Q9H3Q3 398 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 DOPEY2Q9Y3R5 2298 aa8.27□□□□□ -1.09
CAPN3-201ENST00000318023 LDB3O75112 727 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 HMGN2P05204 90 aaKnown RBP8.26□□□□□ -1.09
CAPN3-201ENST00000318023 MELTFP08582 738 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 PI3P19957 117 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 CAMLGP49069 296 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 DLK1P80370 383 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 HAGHQ16775 308 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 PRTGQ2VWP7 1150 aa8.26□□□□□ -1.09
CAPN3-201ENST00000318023 IGF2-ASQ6U949 168 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms