RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 MPC1Q9Y5U8 109 aa15.38■□□□□ 0.05
HMGA1-201ENST00000311487 A6NLC8 198 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 SSX4O60224 188 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 IGHV4-39P01824 125 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 ATF1P18846 271 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 DEFA1P59665 94 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 DEFA3P59666 94 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 HSD17B12Q53GQ0 312 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 IDNKQ5T6J7 187 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 CNIH2Q6PI25 160 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF554Q86TJ5 538 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 C19orf18Q8NEA5 215 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 PP6455Q8WZ26 134 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 CCL17Q92583 94 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 SOSTQ9BQB4 213 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 METTL17Q9H7H0 456 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-201ENST00000311487 TBC1D24Q9ULP9 559 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 TRAV1-2A0A0B4J238 106 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 CDIPTO14735 213 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 SULT1B1O43704 296 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 RHBDL1O75783 438 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 GATBO75879 557 aaKnown RBP15.37■□□□□ 0.05
HMGA1-201ENST00000311487 UCHL1P09936 223 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 IL7P13232 177 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 SPNP16150 400 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 SRMP19623 302 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 RAB3AP20336 220 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 HAAOP46952 286 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 ATP5J2P56134 94 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 MTCP1P56278 107 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF154Q13106 437 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 SFXN4Q6P4A7 337 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 CALHM1Q8IU99 346 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 BOLLQ8N9W6 283 aaKnown RBP15.37■□□□□ 0.05
HMGA1-201ENST00000311487 MICU1Q9BPX6 476 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 CXXC4Q9H2H0 198 aa15.37■□□□□ 0.05
HMGA1-201ENST00000311487 CGGBP1Q9UFW8 167 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-201ENST00000311487 H7C417 338 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 CALCBP10092 127 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 TNFSF4P23510 183 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 PMELP40967 661 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 FAM201AQ5SY85 155 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 ZBTB37Q5TC79 503 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 GDPD1Q8N9F7 314 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 C17orf50Q8WW18 174 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 KCTD12Q96CX2 325 aaKnown RBP15.36■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF488Q96MN9 340 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 RTL8AQ9BWD3 113 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 TCF7L1Q9HCS4 588 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 GCM1Q9NP62 436 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 NKIRAS2Q9NYR9 191 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 CKLFQ9UBR5 152 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 SLC7A11Q9UPY5 501 aa15.36■□□□□ 0.05
HMGA1-201ENST00000311487 AK6Q9Y3D8 172 aaKnown RBP15.36■□□□□ 0.05
HMGA1-201ENST00000311487 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 SPRY1O43609 319 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 ARL6IP5O75915 188 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 IGFBP3P17936 291 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 ADRA2CP18825 462 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 DNASE1P24855 282 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 MAPK3P27361 379 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 MADCAM1Q13477 382 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 HAGHLQ6PII5 290 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 GDPD3Q7L5L3 318 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF525Q8N782 197 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 SCCPDHQ8NBX0 429 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 YIPF5Q969M3 257 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 SEH1LQ96EE3 360 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 BORCS8Q96FH0 119 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 SLC22A4Q9H015 551 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 C1orf123Q9NWV4 160 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 IL19Q9UHD0 177 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 A0A1B0GWJ7 208 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 hCG_1807616A0A1W2PRN6 198 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 PQLC2LA1A4F0 135 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 CYB5R3P00387 301 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 DAOP14920 347 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 RAB3BP20337 219 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 PTH2RP49190 550 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 POU3F4P49335 361 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 CRIP3Q6Q6R5 217 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 METAP1DQ6UB28 335 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-201ENST00000311487 UTS2BQ765I0 119 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 C11orf53Q8IXP5 236 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 CCDC54Q8NEL0 328 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 OR5A2Q8NGI9 324 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 SETD6Q8TBK2 473 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 C10orf35Q96D05 121 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 TMEM165Q9HC07 324 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 ADAM30Q9UKF2 790 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 PPP1R3CQ9UQK1 317 aa15.35■□□□□ 0.05
HMGA1-201ENST00000311487 DYSFO75923 2080 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 A0A1W2PQ09 198 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 SYNGR1O43759 233 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 ANGPTL7O43827 346 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 CSF3P09919 207 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 SRP9P49458 86 aaKnown RBP15.34■□□□□ 0.05
HMGA1-201ENST00000311487 CNN3Q15417 329 aaKnown RBP15.34■□□□□ 0.05
HMGA1-201ENST00000311487 PYDC2Q56P42 97 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 PHYHIPQ92561 330 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms