RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PKIBQ9C010 78 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DUSP21Q9H596 190 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR5V1Q9UGF6 321 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CELSR1Q9NYQ6 3014 aa9.21□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ARHGAP32A7KAX9 2087 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HIVEP1P15822 2718 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 INAFM1C9JVW0 142 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ADAM20O43506 726 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RHBDL1O75783 438 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HSMCR30P0CW71 290 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RAB3AP20336 220 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MAPK3P27361 379 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PITPNBP48739 271 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 POU3F4P49335 361 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NPY4RP50391 375 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MTCP1P56278 107 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PPP3R1P63098 170 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LCN2P80188 198 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HOXA4Q00056 320 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IL24Q13007 206 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 Q499Y3 187 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SLC36A1Q7Z2H8 476 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FAM90A1Q86YD7 464 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PARP16Q8N5Y8 322 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 POC1AQ8NBT0 407 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF485Q8NCK3 441 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SGCDQ92629 289 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GHSRQ92847 366 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PGLYRP3Q96LB9 341 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RASL12Q9NYN1 266 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NLKQ9UBE8 527 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CKLFQ9UBR5 152 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LPAR3Q9UBY5 353 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CLN8Q9UBY8 286 aa9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SIRT4Q9Y6E7 314 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 WNK2Q9Y3S1 2297 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 A0A0G2JMP0 313 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 A0A0X1KG70 313 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 A8MXK9 166 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMPRSS2O15393 492 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PLPP2O43688 288 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SYNGR1O43759 233 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NXPH2O95156 264 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CD1AP06126 327 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 WNT2P09544 360 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PGA5P0DJD9 388 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MPZP25189 248 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SEC61A1P61619 476 aaKnown RBP9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ACSM1Q08AH1 577 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IRF3Q14653 427 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TBCEQ15813 527 aaPredicted RBP9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DCAF12L2Q5VW00 463 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FIP1L1Q6UN15 594 aaKnown RBP9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ANGPTL5Q86XS5 388 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MKXQ8IYA7 352 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SVOPQ8N4V2 548 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR4M2Q8NGB6 313 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR13C5Q8NGS8 318 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RGP1Q92546 391 aaPredicted RBP9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR5M11Q96RB7 305 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GPER1Q99527 375 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 YTHDF1Q9BYJ9 559 aaKnown RBP9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SHARPINQ9H0F6 387 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SNTG1Q9NSN8 517 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMEM160Q9NX00 188 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TAS2R4Q9NYW5 299 aa9.19□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IGKV1-27A0A075B6S5 117 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IGKV1-9A0A0C4DH69 117 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TRBV5-5A0A0J9YX44 114 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR2AT4A6NND4 320 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TRAPPC2LH3BP13 241 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MRPS14O60783 128 aaKnown RBP9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ALX3O95076 343 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GATA3P23771 443 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HIVEP2P31629 2446 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GABRA2P47869 451 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CR1LQ2VPA4 569 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 STUMQ69YW2 141 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 BTNL3Q6UXE8 466 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ACP7Q6ZNF0 438 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SLC25A26Q70HW3 274 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF367Q7RTV3 350 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CALHM1Q8IU99 346 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 Q8IYB0 196 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 BATF2Q8N1L9 274 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PNLDC1Q8NA58 520 aaKnown RBP9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 EMG1Q92979 244 aaKnown RBP9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SLAMF9Q96A28 289 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RFT1Q96AA3 541 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SEH1LQ96EE3 360 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CEP19Q96LK0 163 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SPACA5Q96QH8 159 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR14A2Q96R54 314 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMED9Q9BVK6 235 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DNTTIP1Q9H147 329 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 WDR13Q9H1Z4 485 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ISYNA1Q9NPH2 558 aa9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CDC42EP3Q9UKI2 254 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms