RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MBTPS2O43462 519 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 FHITP49789 147 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 BATFQ16520 125 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 AGBL5Q8NDL9 886 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 CPT1CQ8TCG5 803 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 ZNF721Q8TF20 911 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 RASL12Q9NYN1 266 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 MYOTQ9UBF9 498 aa11.77□□□□□ -0.53
CASC4-201ENST00000299957 SCN4AP35499 1836 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 JTBO76095 146 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 CLDN1O95832 211 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 CCR5P51681 352 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 GRB2P62993 217 aaKnown RBP11.76□□□□□ -0.53
CASC4-201ENST00000299957 FABP9Q0Z7S8 132 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 SHBQ15464 509 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 OXGR1Q96P68 337 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 ZNF385AQ96PM9 386 aaKnown RBP11.76□□□□□ -0.53
CASC4-201ENST00000299957 CCNL2Q96S94 520 aaPredicted RBP11.76□□□□□ -0.53
CASC4-201ENST00000299957 WDR13Q9H1Z4 485 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 MYO7BQ6PIF6 2116 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 TRBV5-5A0A0J9YX44 114 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 GGTLC2Q14390 218 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 C5orf46Q6UWT4 87 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 LYZL2Q7Z4W2 148 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 SPIN2AQ99865 258 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 SPIN2BQ9BPZ2 258 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 P4HTMQ9NXG6 502 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 TNFSF18Q9UNG2 199 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 KCNMB2Q9Y691 235 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 ZNF816-ZNF321PA0A0X1KG74 233 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 LYPD3O95274 346 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 IGHV3-13P01766 116 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 HPNP05981 417 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
CASC4-201ENST00000299957 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
CASC4-201ENST00000299957 ARF1P84077 181 aaKnown RBP11.76□□□□□ -0.53
CASC4-201ENST00000299957 CEBPEQ15744 281 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 ADIRFQ15847 76 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 HPSE2Q8WWQ2 592 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 TTC9Q92623 222 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 SPACA9Q96E40 222 aaPredicted RBP11.76□□□□□ -0.53
CASC4-201ENST00000299957 SSX3Q99909 188 aa11.76□□□□□ -0.53
CASC4-201ENST00000299957 A0A1W2PPH5 198 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 J3QRE1 110 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 LAMTOR5O43504 91 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 SFT2D2O95562 160 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 COL19A1Q14993 1142 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 GUK1Q16774 197 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 PIGYQ3MUY2 71 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 VHLLQ6RSH7 139 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 ASB10Q8WXI3 467 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 RBMXL1Q96E39 390 aaKnown RBP11.75□□□□□ -0.53
CASC4-201ENST00000299957 OR10C1Q96KK4 312 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 WISP1O95388 367 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 GSTP1P09211 210 aaKnown RBP11.75□□□□□ -0.53
CASC4-201ENST00000299957 GALNSP34059 522 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 ARG2P78540 354 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 CCDC74BQ96LY2 380 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 OPA3Q9H6K4 179 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 GEMIN2O14893 280 aaKnown RBP11.75□□□□□ -0.53
CASC4-201ENST00000299957 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
CASC4-201ENST00000299957 ZNF32P17041 273 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 KLK2P20151 261 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 ARRDC1Q8N5I2 433 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 OR11L1Q8NGX0 322 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 PIGQQ9BRB3 760 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 BCO1Q9HAY6 547 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 MED9Q9NWA0 146 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
CASC4-201ENST00000299957 A0A1W2PPE2 198 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 LILRA5A6NI73 299 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 RAB13P51153 203 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 RAB4BP61018 213 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 RNF144BQ7Z419 303 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 CXorf67Q86X51 503 aaPredicted RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 WDSUB1Q8N9V3 476 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 HELZP42694 1942 aaKnown RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 IGLV1-36A0A0B4J1U3 117 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 PRSS44E7EML9 344 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 CCL4P13236 92 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 HNF1AP20823 631 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 GPM6AP51674 278 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 F2RL1P55085 397 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 PMP22Q01453 160 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 SSX9Q7RTT3 188 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 APCDD1LQ8NCL9 501 aa11.74□□□□□ -0.53
CASC4-201ENST00000299957 RPUSD4Q96CM3 377 aaKnown RBP11.74□□□□□ -0.53
CASC4-201ENST00000299957 MVB12AQ96EY5 273 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms