RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 RAB32Q13637 225 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 MPPED2Q15777 294 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 ABHD17BQ5VST6 288 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 KCNRGQ8N5I3 272 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 SGK3Q96BR1 496 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 CRIM1Q9NZV1 1036 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
TTC39B-201ENST00000297615 NCOR2Q9Y618 2525 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 CHD8Q9HCK8 2581 aa11.81□□□□□ -0.52
TTC39B-201ENST00000297615 LOC390937A0A1W2PQ73 354 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 OR6C65A6NJZ3 312 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 TMEM14DPA8MWL7 114 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 KRBOX1C9JBD0 128 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 H0YIZ8 118 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 CNR1P21554 472 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PTGFRP43088 359 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 ASCL1P50553 236 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 MOB3CQ70IA8 216 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 WDR5BQ86VZ2 330 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PRR18Q8N4B5 295 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 GJC3Q8NFK1 279 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 OR13G1Q8NGZ3 307 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF488Q96MN9 340 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 CDC6Q99741 560 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PIGQQ9BRB3 760 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 IL36RNQ9UBH0 155 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 A8MXK9 166 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 FGF2P09038 288 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 RCC1P18754 421 aaPredicted RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 EIF1P41567 113 aaKnown RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 EXT1Q16394 746 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PHLDA2Q53GA4 152 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PGAP1Q75T13 922 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 CARFQ8N187 725 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 ZSCAN4Q8NAM6 433 aaPredicted RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 NELFAQ9H3P2 528 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 RASL12Q9NYN1 266 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 HDGFL3Q9Y3E1 203 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PLCE1Q9P212 2302 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 HPNP05981 417 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 CRHP06850 196 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 RAB6AP20340 208 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 NME2P22392 152 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 SSBP1Q04837 148 aaKnown RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PLEKHN1Q494U1 663 aaPredicted RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.8□□□□□ -0.52
TTC39B-201ENST00000297615 FADS6Q8N9I5 356 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 NEK7Q8TDX7 302 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 REEP6Q96HR9 211 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 ARPC5LQ9BPX5 153 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 UQCC2Q9BRT2 126 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 LDAHQ9H6V9 325 aa11.8□□□□□ -0.52
TTC39B-201ENST00000297615 TACC2O95359 2948 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF850A8MQ14 1090 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 NGFP01138 241 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF84P51523 738 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 PPIAP62937 165 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 LYPD6Q86Y78 171 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 DTWD2Q8NBA8 298 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 OR56B1Q8NGI3 324 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 TMEM230Q96A57 120 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF2Q9BSG1 426 aaPredicted RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 EDEM2Q9BV94 578 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ANGPTL4Q9BY76 406 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 SHARPINQ9H0F6 387 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 NXT1Q9UKK6 140 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 FLVCR1Q9Y5Y0 555 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 C5orf49A4QMS7 147 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 DUS4LO95620 317 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 CCL11P51671 97 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 AKR1D1P51857 326 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 SUMO3P55854 103 aaPredicted RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 PSG4Q00888 419 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF92Q03936 586 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 RSU1Q15404 277 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 PAN3Q58A45 887 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 DOK3Q7L591 496 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 OIT3Q8WWZ8 545 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF700Q9H0M5 742 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 SAV1Q9H4B6 383 aaPredicted RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 SLC7A10Q9NS82 523 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 MCTS1Q9ULC4 181 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 NOSIPQ9Y314 301 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 ZNF292O60281 2723 aa11.79□□□□□ -0.52
TTC39B-201ENST00000297615 TLN1Q9Y490 2541 aaKnown RBP11.79□□□□□ -0.52
TTC39B-201ENST00000297615 SPTBN1Q01082 2364 aaKnown RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 GEMIN2O14893 280 aaKnown RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR7C1O76099 320 aaPredicted RBP11.78□□□□□ -0.52
TTC39B-201ENST00000297615 DKK1O94907 266 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR2F2O95006 317 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 AKR1C3P42330 323 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 NPBWR2P48146 333 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 OR2F1Q13607 317 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 TMEM128Q5BJH2 165 aa11.78□□□□□ -0.52
TTC39B-201ENST00000297615 HES3Q5TGS1 186 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms