RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MRPS28Q9Y2Q9 187 aaKnown RBP21.05■□□□□ 0.96
SSBP4-201ENST00000270061 TMEM14DPA8MWL7 114 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 J3QW42 95 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 LYRM1O43325 122 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 SSX4O60224 188 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 GMDSO60547 372 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 MALLQ13021 153 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 Q5PR19 223 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 AWAT2Q6E213 333 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 RNF144BQ7Z419 303 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 SLC30A7Q8NEW0 376 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 SPACA5Q96QH8 159 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 GSX2Q9BZM3 304 aa21.05■□□□□ 0.96
SSBP4-201ENST00000270061 RBFOX1Q9NWB1 397 aaKnown RBP21.05■□□□□ 0.96
SSBP4-201ENST00000270061 CISD1Q9NZ45 108 aaKnown RBP21.05■□□□□ 0.96
SSBP4-201ENST00000270061 RBMX2Q9Y388 322 aaKnown RBP21.05■□□□□ 0.96
SSBP4-201ENST00000270061 CD3GP09693 182 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 VSIG8P0DPA2 414 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 CNN3Q15417 329 aaKnown RBP21.04■□□□□ 0.96
SSBP4-201ENST00000270061 SLC22A25Q6T423 547 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 PNLDC1Q8NA58 520 aaKnown RBP21.04■□□□□ 0.96
SSBP4-201ENST00000270061 FCAMRQ8WWV6 532 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 MS4A3Q96HJ5 214 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 C1orf147Q96MC9 270 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-201ENST00000270061 TECTBQ96PL2 329 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 OBP2BQ9NPH6 170 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 C2CD3Q4AC94 2353 aa21.04■□□□□ 0.96
SSBP4-201ENST00000270061 ZNF816-ZNF321PA0A0X1KG74 233 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 FUOMA2VDF0 154 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 DANCRP0C864 163 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 PRKACBP22694 351 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 UNC119Q13432 240 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 GK2Q14410 553 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-201ENST00000270061 TBC1D28Q2M2D7 210 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 GLIPR1L1Q6UWM5 242 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 GPER1Q99527 375 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 POU2F3Q9UKI9 436 aa21.03■□□□□ 0.96
SSBP4-201ENST00000270061 METTL21EPA6NDL7 271 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 ICMTO60725 284 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 SOD3P08294 240 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 NAT2P11245 290 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 CBR1P16152 277 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 OR3A4PP47883 348 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 BCAP31P51572 246 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 RAB12Q6IQ22 244 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 DUSP18Q8NEJ0 188 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 CPNE2Q96FN4 548 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-201ENST00000270061 NEDD4LQ96PU5 975 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 GPR173Q9NS66 373 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 STARD10Q9Y365 291 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 ORC5O43913 435 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 SCGNO76038 276 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 KDM4BO94953 1096 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 NRASP01111 189 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 PAX1P15863 534 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 WNT5AP41221 380 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 PTGFRP43088 359 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 OR10K2Q6IF99 312 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 PRSS57Q6UWY2 283 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 TOMM5Q8N4H5 51 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 OR5L1Q8NGL2 311 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 OR52I2Q8NH67 350 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 UBASH3BQ8TF42 649 aa21.02■□□□□ 0.96
SSBP4-201ENST00000270061 C7orf50Q9BRJ6 194 aaKnown RBP21.02■□□□□ 0.96
SSBP4-201ENST00000270061 NUDT16L1Q9BRJ7 211 aaKnown RBP21.02■□□□□ 0.96
SSBP4-201ENST00000270061 ZNF701Q9NV72 531 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-201ENST00000270061 TRAV18A0A075B6X5 111 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 NGFP01138 241 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 FAM157BP0CG42 384 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 GDNFP39905 211 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 DYRK1AQ13627 763 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 KCNG3Q8TAE7 436 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 AUNIPQ9H7T9 357 aa21.01■□□□□ 0.95
SSBP4-201ENST00000270061 GPR176Q14439 515 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 FAM189A2Q15884 450 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 MRPL21Q7Z2W9 205 aaKnown RBP21■□□□□ 0.95
SSBP4-201ENST00000270061 ZNF101Q8IZC7 436 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 FAM46BQ96A09 425 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 MYEF2Q9P2K5 600 aaKnown RBP21■□□□□ 0.95
SSBP4-201ENST00000270061 CACNG2Q9Y698 323 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 ECDO95905 644 aaPredicted RBP21■□□□□ 0.95
SSBP4-201ENST00000270061 IGKV3-15P01624 115 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 KLF9Q13886 244 aaPredicted RBP21■□□□□ 0.95
SSBP4-201ENST00000270061 LHFPL2Q6ZUX7 228 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 CSNK2A3Q8NEV1 391 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 ENKURQ8TC29 256 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 DLL4Q9NR61 685 aa21■□□□□ 0.95
SSBP4-201ENST00000270061 SULT1C2O00338 296 aa20.99■□□□□ 0.95
SSBP4-201ENST00000270061 PFDN1O60925 122 aa20.99■□□□□ 0.95
SSBP4-201ENST00000270061 FOSL1P15407 271 aa20.99■□□□□ 0.95
SSBP4-201ENST00000270061 ATP5J2P56134 94 aa20.99■□□□□ 0.95
SSBP4-201ENST00000270061 RNASE12Q5GAN4 147 aaKnown RBP20.99■□□□□ 0.95
SSBP4-201ENST00000270061 NPRL2Q8WTW4 380 aa20.99■□□□□ 0.95
SSBP4-201ENST00000270061 CENPXA8MT69 81 aa20.98■□□□□ 0.95
SSBP4-201ENST00000270061 E7EQL1 145 aa20.98■□□□□ 0.95
SSBP4-201ENST00000270061 OVOL3O00110 214 aa20.98■□□□□ 0.95
SSBP4-201ENST00000270061 RAB27BO00194 218 aa20.98■□□□□ 0.95
SSBP4-201ENST00000270061 CST4P01036 141 aa20.98■□□□□ 0.95
SSBP4-201ENST00000270061 GSTT2BP0CG30 244 aa20.98■□□□□ 0.95
SSBP4-201ENST00000270061 SRP9P49458 86 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms