RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 A0A0J9YW62 118 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 H7C2Y5 167 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 CTSDP07339 412 aaPredicted RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 UMODP07911 640 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 ACKR3P25106 362 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 SGPP2Q8IWX5 399 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 C20orf196Q8IYI0 205 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 NTNG2Q96CW9 530 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 DKKL1Q9UK85 242 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 MSTNO14793 375 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 LRP3O75074 770 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 COX6A1P12074 109 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 MRPS34P82930 218 aaKnown RBP13.29□□□□□ -0.28
DDX56-201ENST00000258772 LYSMD4Q5XG99 296 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 DHRS7BQ6IAN0 325 aaPredicted RBP13.29□□□□□ -0.28
DDX56-201ENST00000258772 OR2A2Q6IF42 318 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 EIF5AL1Q6IS14 154 aaKnown RBP13.29□□□□□ -0.28
DDX56-201ENST00000258772 OR10Z1Q8NGY1 313 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 OR2AE1Q8NHA4 323 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 ZNF700Q9H0M5 742 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 RHOFQ9HBH0 211 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 ANXA10Q9UJ72 324 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 WDFY3Q8IZQ1 3526 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 CRYM-AS1A6NIL9 109 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 TNFSF11O14788 317 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 SNAPINO95295 136 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
DDX56-201ENST00000258772 CRYGSP22914 178 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 SSR4P51571 173 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 CAV2P51636 162 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 RAC1P63000 192 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 IL11RAQ14626 422 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 EXT1Q16394 746 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 HFEQ30201 348 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 SPAG16Q8N0X2 631 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 FNDC9Q8TBE3 224 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 FAAP24Q9BTP7 215 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 METTL9Q9H1A3 318 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 SH2D2AQ9NP31 389 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 EDARQ9UNE0 448 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 PRELID3BQ9Y3B1 194 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 FAM96BQ9Y3D0 163 aa13.29□□□□□ -0.28
DDX56-201ENST00000258772 PTRH2Q9Y3E5 179 aaKnown RBP13.29□□□□□ -0.28
DDX56-201ENST00000258772 ANGPTL7O43827 346 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 KLK3P07288 261 aaPredicted RBP13.28□□□□□ -0.28
DDX56-201ENST00000258772 OR5H8P0DN80 308 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 RCC1P18754 421 aaPredicted RBP13.28□□□□□ -0.28
DDX56-201ENST00000258772 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
DDX56-201ENST00000258772 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 TAF9Q16594 264 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 HLA-BQ31612 363 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 PLXDC2Q6UX71 529 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 NAT6Q93015 286 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 SPSB1Q96BD6 273 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 LIME1Q9H400 295 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 TUBD1Q9UJT1 453 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 PADI1Q9ULC6 663 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 HSF4Q9ULV5 492 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 K7EPK0 472 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 SGCEO43556 437 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 SPRY1O43609 319 aaPredicted RBP13.28□□□□□ -0.28
DDX56-201ENST00000258772 KLF7O75840 302 aaPredicted RBP13.28□□□□□ -0.28
DDX56-201ENST00000258772 CST4P01036 141 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 MUC1P15941 1255 aaPredicted RBP13.28□□□□□ -0.28
DDX56-201ENST00000258772 LPAR6P43657 344 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 NPBWR1P48145 328 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 RRADP55042 308 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 RSU1Q15404 277 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 GGNBP1Q5YKI7 109 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 FAM71E2Q8N5Q1 922 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 TMEM156Q8N614 296 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 M1APQ8TC57 530 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 MR1Q95460 341 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 REEP6Q96HR9 211 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 NRIP2Q9BQI9 281 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 SRXN1Q9BYN0 137 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 AK3Q9UIJ7 227 aa13.28□□□□□ -0.28
DDX56-201ENST00000258772 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 FAM230AA0A1W2PPH8 454 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 SYNGR3O43761 229 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 DEDDO75618 318 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 IFNA21P01568 189 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 FOSL1P15407 271 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 SULT1A2P50226 295 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 RAB35Q15286 201 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 TMEM268Q5VZI3 342 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 RPS19BP1Q86WX3 136 aaKnown RBP13.27□□□□□ -0.28
DDX56-201ENST00000258772 MRPL24Q96A35 216 aaKnown RBP13.27□□□□□ -0.28
DDX56-201ENST00000258772 ZNF581Q9P0T4 197 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 RCC2Q9P258 522 aaKnown RBP13.27□□□□□ -0.28
DDX56-201ENST00000258772 HS3ST3B1Q9Y662 390 aa13.27□□□□□ -0.28
DDX56-201ENST00000258772 MED6O75586 246 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 CBR3O75828 277 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 PVALBP20472 110 aaPredicted RBP13.27□□□□□ -0.29
DDX56-201ENST00000258772 NME2P22392 152 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 FCGR2CP31995 323 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 HGFACQ04756 655 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 SMCO1Q147U7 214 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 ZNF774Q6NX45 483 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms