RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 KAAG1Q9UBP8 84 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 DNAJB11Q9UBS4 358 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 OR5V1Q9UGF6 321 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 CLEC2DQ9UHP7 191 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 PSORS1C1Q9UIG5 152 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 HHLA2Q9UM44 414 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 SLC7A11Q9UPY5 501 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 CAB39Q9Y376 341 aaPredicted RBP7.09□□□□□ -1.27
TMEM258-201ENST00000257262 EXOSC1Q9Y3B2 195 aaKnown RBP7.09□□□□□ -1.27
TMEM258-201ENST00000257262 INSIG2Q9Y5U4 225 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 HIVEP2P31629 2446 aa7.09□□□□□ -1.27
TMEM258-201ENST00000257262 ARHGAP32A7KAX9 2087 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 TRBV2A0A0J9YWF9 115 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 KIR2DS1A0A191URI9 304 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 A0A1B0GW55 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 EFCAB10A6NFE3 127 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 TMPRSS2O15393 492 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 ZFPL1O95159 310 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 ATP6V1G2O95670 118 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 LALBAP00709 142 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 IFNA2P01563 188 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 TFF1P04155 84 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 CCDC159P0C7I6 412 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L2P0CJ85 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L3P0CJ86 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L4P0CJ87 422 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L5P0CJ88 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L6P0CJ89 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L7P0CJ90 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 PIPP12273 146 aaPredicted RBP7.08□□□□□ -1.28
TMEM258-201ENST00000257262 ZNF20P17024 532 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 ADRA2CP18825 462 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 MYL12AP19105 171 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 AMY2BP19961 511 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 TGM4P49221 684 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 NPY4RP50391 375 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 FUT6P51993 359 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 STUMQ69YW2 141 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 XAF1Q6GPH4 301 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 RPL22L1Q6P5R6 122 aaKnown RBP7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4L9Q6RFH8 374 aaPredicted RBP7.08□□□□□ -1.28
TMEM258-201ENST00000257262 TMPRSS11AQ6ZMR5 421 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 ZNF573Q86YE8 665 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 FGFRL1Q8N441 504 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 OR13C3Q8NGS6 347 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 HAVCR2Q8TDQ0 301 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 RAB40AQ8WXH6 277 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 GATAD2BQ8WXI9 593 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 PP6455Q8WZ26 134 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 TMIGD2Q96BF3 282 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 C12orf43Q96C57 262 aaKnown RBP7.08□□□□□ -1.28
TMEM258-201ENST00000257262 C10orf35Q96D05 121 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 PDCD1LG2Q9BQ51 273 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 CHST5Q9GZS9 411 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 COMMD4Q9H0A8 199 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 SMURF1Q9HCE7 757 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 BABAM2Q9NXR7 383 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 NLKQ9UBE8 527 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 DUX4Q9UBX2 424 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 OPN4Q9UHM6 478 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 SIRT4Q9Y6E7 314 aaPredicted RBP7.08□□□□□ -1.28
TMEM258-201ENST00000257262 CSPG4Q6UVK1 2322 aa7.08□□□□□ -1.28
TMEM258-201ENST00000257262 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 IGHV2-70DA0A0C4DH43 119 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 IGKV1-9A0A0C4DH69 117 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 TMEM212A6NML5 194 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 OR2AT4A6NND4 320 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 J3QT63 122 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 NDUFB3O43676 98 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 NOS1APO75052 506 aaPredicted RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 GATBO75879 557 aaKnown RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 INMTO95050 263 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 PSG2P11465 335 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 ATF1P18846 271 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 AZGP1P25311 298 aaKnown RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 C21orf33P30042 268 aaPredicted RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 ATP1B3P54709 279 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 PAX8Q06710 450 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 IL24Q13007 206 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 MED21Q13503 144 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 RIPK1Q13546 671 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 CNN3Q15417 329 aaKnown RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 C6orf141Q5SZD1 244 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 ATPAF1Q5TC12 328 aaPredicted RBP7.07□□□□□ -1.28
TMEM258-201ENST00000257262 CD276Q5ZPR3 534 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 BTNL3Q6UXE8 466 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 IZUMO2Q6UXV1 221 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 ACP7Q6ZNF0 438 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 ZNF788Q6ZQV5 615 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 AHSA2Q719I0 299 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 BTN2A1Q7KYR7 527 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 SLC36A1Q7Z2H8 476 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 BATF2Q8N1L9 274 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 STX19Q8N4C7 294 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 FAM216BQ8N7L0 139 aa7.07□□□□□ -1.28
TMEM258-201ENST00000257262 POC1AQ8NBT0 407 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms