RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 EMCNQ9ULC0 261 aa11.89□□□□□ -0.51
NEK9-201ENST00000238616 CSN3P07498 182 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 SP6Q3SY56 376 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 WIPI1Q5MNZ9 446 aaPredicted RBP11.88□□□□□ -0.51
NEK9-201ENST00000238616 TEX261Q6UWH6 196 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 LILRB4Q8NHJ6 448 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 S1PR5Q9H228 398 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 GPX8Q8TED1 209 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.88□□□□□ -0.51
NEK9-201ENST00000238616 PSG11Q9UQ72 335 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 HMGN4O00479 90 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 VAMP5O95183 116 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 ELFN2Q5R3F8 820 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 PRDM7Q9NQW5 492 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 MED19A0JLT2 244 aaPredicted RBP11.88□□□□□ -0.51
NEK9-201ENST00000238616 ACHEP22303 614 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 MMP11P24347 488 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 TNXAQ16473 311 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 GGTA1PQ4G0N0 100 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 TMEM116Q8NCL8 245 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 MORN4Q8NDC4 146 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 ZDHHC5Q9C0B5 715 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 PNLIPRP2P54317 469 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
NEK9-201ENST00000238616 CEBPEQ15744 281 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 CD276Q5ZPR3 534 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 TMEM215Q68D42 235 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 OR2D2Q9H210 308 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 A0A1W2PN81 502 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 MGMTP16455 207 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 CHRNA7P36544 502 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 CYS1Q717R9 158 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 R4GMQ9 66 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 BSGP35613 385 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 CLDN10P78369 228 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 ZNF574Q6ZN55 896 aaPredicted RBP11.88□□□□□ -0.51
NEK9-201ENST00000238616 TIMP4Q99727 224 aa11.88□□□□□ -0.51
NEK9-201ENST00000238616 ARHGAP21Q5T5U3 1957 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TO15178 435 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 DUSP6Q16828 381 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 ARIH2OSQ8N7S6 290 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 WNT1P04628 370 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 ARG1P05089 322 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TGFBR1P36897 503 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 DIO1P49895 249 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 Q3ZCU0 254 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 CST9Q5W186 159 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 ZNF841Q6ZN19 808 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 WFDC5Q8TCV5 224 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 DYNC2LI1Q8TCX1 351 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TM4SF19Q96DZ7 209 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TAAR9Q96RI9 348 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 GMPR2Q9P2T1 348 aaKnown RBP11.87□□□□□ -0.51
NEK9-201ENST00000238616 SSC5DA1L4H1 1573 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 OR3A1P47881 315 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEK9-201ENST00000238616 ECSCRQ19T08 205 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 MS4A6EQ96DS6 147 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 DAPP1Q9UN19 280 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 PRRT4C9JH25 899 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 SYT14P1Q58G82 188 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 FAM122BQ7Z309 247 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 SCN4AP35499 1836 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TUBAL3A6NHL2 446 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 TMPRSS11DO60235 418 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 ADRB1P08588 477 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 FUT6P51993 359 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
NEK9-201ENST00000238616 Q7L0L9 218 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 SIRT3Q9NTG7 399 aaPredicted RBP11.87□□□□□ -0.51
NEK9-201ENST00000238616 PPP1CAP62136 330 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 OR2F1Q13607 317 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 PMS2P11Q13670 270 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 CHODLQ9H9P2 273 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 PDLIM7Q9NR12 457 aa11.87□□□□□ -0.51
NEK9-201ENST00000238616 THAP10Q9P2Z0 257 aaPredicted RBP11.87□□□□□ -0.51
NEK9-201ENST00000238616 ARNTLO00327 626 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 PPOXP50336 477 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 SCARB1Q8WTV0 552 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 NUDT8Q8WV74 236 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 OR5V1Q9UGF6 321 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 ACAA2P42765 397 aaKnown RBP11.86□□□□□ -0.51
NEK9-201ENST00000238616 GUSBP11Q6P575 273 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 OR1N2Q8NGR9 330 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 PTPMT1Q8WUK0 201 aaPredicted RBP11.86□□□□□ -0.51
NEK9-201ENST00000238616 SPACA9Q96E40 222 aaPredicted RBP11.86□□□□□ -0.51
NEK9-201ENST00000238616 MMP25Q9NPA2 562 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 FLVCR2Q9UPI3 526 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 CGB1A6NKQ9 187 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 TAAR5O14804 337 aa11.86□□□□□ -0.51
NEK9-201ENST00000238616 TTRP02766 147 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms