RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 MYL9P24844 172 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 HAAOP46952 286 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 ATP1B3P54709 279 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 DDI2Q5TDH0 399 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
LIM2-201ENST00000221973 ZNF826PQ6ZT77 177 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 LHFPL2Q6ZUX7 228 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 RNF144BQ7Z419 303 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 LRRTM1Q86UE6 522 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 ANGPTL5Q86XS5 388 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 ZNF573Q86YE8 665 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 NKX3-1Q99801 234 aaPredicted RBP13.84□□□□□ -0.19
LIM2-201ENST00000221973 NAA50Q9GZZ1 169 aaKnown RBP13.84□□□□□ -0.19
LIM2-201ENST00000221973 OR51I2Q9H344 312 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 FN3KRPQ9HA64 309 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 GCM1Q9NP62 436 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 SNTG1Q9NSN8 517 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 C1orf123Q9NWV4 160 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 PPP1R3CQ9UQK1 317 aa13.84□□□□□ -0.19
LIM2-201ENST00000221973 LRP5LA4QPB2 252 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 CDIPTO14735 213 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 SSX4O60224 188 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 PTBP3O95758 552 aaKnown RBP13.83□□□□□ -0.2
LIM2-201ENST00000221973 PLATP00750 562 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 ALDOBP05062 364 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 ADRA2CP18825 462 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 COL8A2P25067 703 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 PMELP40967 661 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 GATA4P43694 442 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 KISS1Q15726 138 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 FAM76BQ5HYJ3 339 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 GDPGP1Q6ZNW5 385 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 ANKRD13BQ86YJ7 626 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 CLVS1Q8IUQ0 354 aaPredicted RBP13.83□□□□□ -0.2
LIM2-201ENST00000221973 C11orf53Q8IXP5 236 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 SCCPDHQ8NBX0 429 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 CCL17Q92583 94 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 RDH5Q92781 318 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 YIPF5Q969M3 257 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 KCTD7Q96MP8 289 aa13.83□□□□□ -0.2
LIM2-201ENST00000221973 TRAV1-2A0A0B4J238 106 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 hCG_1807616A0A1W2PRN6 198 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 SHISA3A0PJX4 238 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 TGFBR1P36897 503 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 POU3F4P49335 361 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 BLMHQ13867 455 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 CARTPTQ16568 116 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 SLC16A12Q6ZSM3 486 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 CALHM1Q8IU99 346 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 OR5D18Q8NGL1 313 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 GPER1Q99527 375 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 TLNRD1Q9H1K6 362 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 BARX1Q9HBU1 254 aaPredicted RBP13.82□□□□□ -0.2
LIM2-201ENST00000221973 DCAF16Q9NXF7 216 aa13.82□□□□□ -0.2
LIM2-201ENST00000221973 AK6Q9Y3D8 172 aaKnown RBP13.82□□□□□ -0.2
LIM2-201ENST00000221973 ARFGEF3Q5TH69 2177 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 IGHV4-30-2A0A087WSY4 118 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 SMIM30A4D0T7 59 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 MEGF11A6BM72 1044 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 J3QT63 122 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 SYNGR1O43759 233 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 CD5LO43866 347 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 ZNF93P35789 620 aaPredicted RBP13.81□□□□□ -0.2
LIM2-201ENST00000221973 NCS1P62166 190 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 HFEQ30201 348 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 CRIP3Q6Q6R5 217 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 JAGN1Q8N5M9 183 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 NKAIN3Q8N8D7 197 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 OR11L1Q8NGX0 322 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 AQP3Q92482 292 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 ERGIC1Q969X5 290 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 TMEM106BQ9NUM4 274 aa13.81□□□□□ -0.2
LIM2-201ENST00000221973 YLPM1P49750 1951 aaKnown RBP13.81□□□□□ -0.2
LIM2-201ENST00000221973 PDCD5O14737 125 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 SPRY1O43609 319 aaPredicted RBP13.8□□□□□ -0.2
LIM2-201ENST00000221973 RHBDL1O75783 438 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 GABARAPO95166 117 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 CYB5R3P00387 301 aaPredicted RBP13.8□□□□□ -0.2
LIM2-201ENST00000221973 IRF2P14316 349 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 SDC2P34741 201 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 MTNR1BP49286 362 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 GMFBP60983 142 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 VBP1P61758 197 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 HOXA4Q00056 320 aaPredicted RBP13.8□□□□□ -0.2
LIM2-201ENST00000221973 MXD1Q05195 221 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 WDR82Q6UXN9 313 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 SLC25A26Q70HW3 274 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 BATF2Q8N1L9 274 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 ZNF525Q8N782 197 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 BOLLQ8N9W6 283 aaKnown RBP13.8□□□□□ -0.2
LIM2-201ENST00000221973 SPATA3Q8NHX4 192 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 Q8TCH9 128 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 LRRC29Q8WV35 223 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 CPNE2Q96FN4 548 aaPredicted RBP13.8□□□□□ -0.2
LIM2-201ENST00000221973 GFI1Q99684 422 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 PKIBQ9C010 78 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 FAM192AQ9GZU8 254 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 METTL17Q9H7H0 456 aaPredicted RBP13.8□□□□□ -0.2
LIM2-201ENST00000221973 RNF7Q9UBF6 113 aa13.8□□□□□ -0.2
LIM2-201ENST00000221973 LRRC30A6NM36 301 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms